RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 SLC38A9Q8NBW4 561 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 NUDT16L1Q9BRJ7 211 aaKnown RBP10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 FAM86C1Q9NVL1 165 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 TREM2Q9NZC2 230 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 ANXA10Q9UJ72 324 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 TUBD1Q9UJT1 453 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 NOSIPQ9Y314 301 aaKnown RBP10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 MMACHCQ9Y4U1 282 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 TLCD2A6NGC4 264 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 GPR137BO60478 399 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 CTSDP07339 412 aaPredicted RBP10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 DLK1P80370 383 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 RUNX1Q01196 453 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 GAMTQ14353 236 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF574Q6ZN55 896 aaPredicted RBP10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 OR2AE1Q8NHA4 323 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 INTS12Q96CB8 462 aaKnown RBP10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 SLC7A11Q9UPY5 501 aa10.12□□□□□ -0.79
UBE2L3-202ENST00000458578 RBFOX3A6NFN3 312 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF726A6NNF4 738 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 SERPINE3A8MV23 424 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 ST8SIA3O43173 380 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 GALNSP34059 522 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 MTCP1P56278 107 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 RNF4P78317 190 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 THEM4Q5T1C6 240 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 C5orf24Q7Z6I8 188 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 CYB561D1Q8N8Q1 229 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF610Q8N9Z0 462 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 CCDC54Q8NEL0 328 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 NOXO1Q8NFA2 376 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 NTNG2Q96CW9 530 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 CHST5Q9GZS9 411 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 GFOD1Q9NXC2 390 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 AK3Q9UIJ7 227 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 HS3ST3B1Q9Y662 390 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 SOD3P08294 240 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF43P17038 809 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 FASLGP48023 281 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF41P51814 821 aaPredicted RBP10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 RND3P61587 244 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 GNMTQ14749 295 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 FAM69BQ5VUD6 431 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 SLC22A25Q6T423 547 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 FAM89BQ8N5H3 189 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 MUCL1Q96DR8 90 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 GINS3Q9BRX5 216 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 NAA60Q9H7X0 242 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 FER1L5A0AVI2 2057 aa10.11□□□□□ -0.79
UBE2L3-202ENST00000458578 CCDC187A0A096LP49 1063 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF724A8MTY0 619 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 MSTNO14793 375 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PPP1R2P9O14990 202 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BKO60814 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BJP06899 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PNLIPP16233 465 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BOP23527 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 ATP6V0CP27449 155 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BBP33778 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PMELP40967 661 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BDP58876 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BCP62807 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 NKX6-1P78426 367 aaPredicted RBP10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 TLE1Q04724 770 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 C17orf67Q0P5P2 114 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST2H2BEQ16778 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 TMEM176BQ3YBM2 270 aaPredicted RBP10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 COMMD1Q8N668 190 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BHQ93079 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BNQ99877 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 HIST1H2BMQ99879 126 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 SUCNR1Q9BXA5 334 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 MRPL13Q9BYD1 178 aaKnown RBP10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PPP4R1LQ9P1A2 415 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 IGHV3-15A0A0B4J1V0 119 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 C2CD4DB7Z1M9 353 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PGA4P0DJD7 388 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 PGA3P0DJD8 388 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 CD38P28907 300 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 GUCA1AP43080 201 aaPredicted RBP10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 CSNK1A1P48729 337 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 CLDN17P56750 224 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.794e-6■■□□□ 12.7
UBE2L3-202ENST00000458578 ZP4Q12836 540 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 TMEM187Q14656 261 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 OR2T2Q6IF00 324 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 TSTD1Q8NFU3 115 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 ZDHHC12Q96GR4 267 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 SDHAF3Q9NRP4 125 aa10.1□□□□□ -0.79
UBE2L3-202ENST00000458578 ANKUB1A6NFN9 424 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms