RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RFT1Q96AA3 541 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 CEP19Q96LK0 163 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 OR8B2Q96RD0 313 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 TMED9Q9BVK6 235 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 DNTTIP1Q9H147 329 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 PPIL3Q9H2H8 161 aaKnown RBP8.36□□□□□ -1.07
ATG4A-206ENST00000457035 LPAR2Q9HBW0 351 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 NEK6Q9HC98 313 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 NOX4Q9NPH5 578 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 TMEM138Q9NPI0 162 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 MMP26Q9NRE1 261 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 HIF1ANQ9NWT6 349 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 DNAJB11Q9UBS4 358 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 ZNF222Q9UK12 451 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 FOXJ3Q9UPW0 622 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
ATG4A-206ENST00000457035 TRAV20A0A0B4J274 112 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 PPIAL4CA0A0B4J2A2 164 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 A0A1B0GW55 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 MAGEA13PA6NCF6 341 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 RFPL4AA6NLU0 287 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 RFPL4AL1F8VTS6 287 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 TMPRSS2O15393 492 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 ANGPTL7O43827 346 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 INMTO95050 263 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 NXPH2O95156 264 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 PLATP00750 562 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 TFF1P04155 84 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 OCMP0CE72 109 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 BCL3P20749 454 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 MAPK3P27361 379 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 BDKRB2P30411 391 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 PITPNBP48739 271 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 POU3F4P49335 361 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 NPY4RP50391 375 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 RPS25P62851 125 aaKnown RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 TRAM1Q15629 374 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 SMIM21Q3B7S5 101 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 ESCO2Q56NI9 601 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 FAM27D1Q5T7N8 215 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 ASCL4Q6XD76 172 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 NLRC3Q7RTR2 1065 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 CEACAM19Q7Z692 300 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 LYPD6Q86Y78 171 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 SAXO1Q8IYX7 474 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 ZSCAN4Q8NAM6 433 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 THRSPQ92748 146 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DACT3Q96B18 629 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 SDSLQ96GA7 329 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 GAFA1Q96PS6 74 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 SSBP3Q9BWW4 388 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-206ENST00000457035 SMURF1Q9HCE7 757 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DUX4Q9UBX2 424 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 MAB21L2Q9Y586 359 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 CUBNO60494 3623 aa8.35□□□□□ -1.07
ATG4A-206ENST00000457035 DVL1O14640 695 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SIGLEC5O15389 551 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 MAGEB3O15480 346 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 KDM4BO94953 1096 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SFTPBP07988 381 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 UCHL1P09936 223 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 CD37P11049 281 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SRMP19623 302 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 PRDX2P32119 198 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 ZNF93P35789 620 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-206ENST00000457035 PTGFRP43088 359 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 GABRA2P47869 451 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 GNB2P62879 340 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 PPP3R1P63098 170 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 FABP5Q01469 135 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 DGUOKQ16854 277 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SYT6Q5T7P8 510 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-206ENST00000457035 DDI2Q5TDH0 399 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SLC36A1Q7Z2H8 476 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 GLCCI1Q86VQ1 547 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 Q8IYB0 196 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 FAM58AQ8N1B3 248 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 FGFRL1Q8N441 504 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 FAM216BQ8N7L0 139 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 Q8NFD4 153 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 PXT1Q8NFP0 134 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 PHYHIPQ92561 330 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 FCGR1BQ92637 280 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 MED30Q96HR3 178 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 NKX3-1Q99801 234 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-206ENST00000457035 ZNF696Q9H7X3 374 aa8.34□□□□□ -1.07
ATG4A-206ENST00000457035 SEBOXQ9HB31 216 aaPredicted RBP8.34□□□□□ -1.07
ATG4A-206ENST00000457035 RBFOX1Q9NWB1 397 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms