RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	MED30	Q96HR3	178 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	AMELY	Q99218	206 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	MRO	Q9BYG7	248 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	PRSS22	Q9GZN4	317 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	CCDC90B	Q9GZT6	254 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	OPA3	Q9H6K4	179 aa		10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	DIMT1	Q9UNQ2	313 aa	Known RBP	10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.64	□□□□□ -0.71
SNHG17-208	ENST00000456953	ANKRD30BL	A7E2S9	258 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	VGLL3	A8MV65	326 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953		J3QRE1	110 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	PSMD9	O00233	223 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	RGS10	O43665	173 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	IGHA1	P01876	353 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	ALDOB	P05062	364 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	KRT8	P05787	483 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	CDK1	P06493	297 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	HSD11B1	P28845	292 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	DDOST	P39656	456 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	CAV3	P56539	151 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	ACTA2	P62736	377 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	GRB2	P62993	217 aa	Known RBP	10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	ACTG2	P63267	376 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	CD83	Q01151	205 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF85	Q03923	595 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	GLYATL3	Q5SZD4	288 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	FAM220A	Q7Z4H9	259 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	WDR86	Q86TI4	376 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	LHFPL3	Q86UP9	236 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	OR1M1	Q8NGA1	313 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	RNF133	Q8WVZ7	376 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	DPF1	Q92782	380 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	OR5M11	Q96RB7	305 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	OR8B4	Q96RC9	309 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	ALG8	Q9BVK2	526 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	GPR61	Q9BZJ8	451 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	GNG8	Q9UK08	70 aa		10.63	□□□□□ -0.71
SNHG17-208	ENST00000456953	DNAH7	Q8WXX0	4024 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	MYL12B	O14950	172 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF254	O75437	659 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	NDUFB7	P17568	137 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	C21orf33	P30042	268 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	HOXD3	P31249	432 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	OPRL1	P41146	370 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	RIDA	P52758	137 aa	Known RBP	10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	GABARAPL2	P60520	117 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ROM1	Q03395	351 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	GALE	Q14376	348 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	DGUOK	Q16854	277 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	DEGS2	Q6QHC5	323 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	DRAM2	Q6UX65	266 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	TMPRSS11A	Q6ZMR5	421 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF788	Q6ZQV5	615 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	PLEKHG7	Q6ZR37	379 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	SSX6	Q7RTT6	188 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF679	Q8IYX0	411 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	YIPF7	Q8N8F6	280 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	OR5T2	Q8NGG2	359 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	JAM3	Q9BX67	310 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	TLNRD1	Q9H1K6	362 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	DUSP21	Q9H596	190 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	FKBP14	Q9NWM8	211 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ERVK13-1	Q9NX77	482 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF391	Q9UJN7	358 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	TCF19	Q9Y242	345 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	ERGIC3	Q9Y282	383 aa		10.62	□□□□□ -0.71
SNHG17-208	ENST00000456953	TRBV23-1	A0A0A0MS06	115 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	METTL15	A6NJ78	407 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953		J3QLW9	94 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	SIGLEC5	O15389	551 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	MAGEB4	O15481	346 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	SULT1C4	O75897	302 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	TNFAIP8	O95379	198 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	APOC1	P02654	83 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	ZNF19	P17023	458 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	ANOS1	P23352	680 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	OTX1	P32242	354 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	VDAC2	P45880	294 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	ETV1	P50549	477 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	PRKX	P51817	358 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	LGALS4	P56470	323 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	KCTD21	Q4G0X4	260 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	TP53I3	Q53FA7	332 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	RNF144B	Q7Z419	303 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	KCTD20	Q7Z5Y7	419 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	OR5AU1	Q8NGC0	362 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	GAFA1	Q96PS6	74 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	KCNJ15	Q99712	375 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	NIPAL2	Q9H841	368 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	HEXA-AS1	Q9H8Q6	139 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	SNTG1	Q9NSN8	517 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	MRM2	Q9UI43	246 aa	Known RBP	10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	PITPNC1	Q9UKF7	332 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	LRP12	Q9Y561	859 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	N6AMT1	Q9Y5N5	214 aa		10.61	□□□□□ -0.71
SNHG17-208	ENST00000456953	SNX5	Q9Y5X3	404 aa		10.61	□□□□□ -0.71

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