RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FBP1P09467 338 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 CCDC159P0C7I6 412 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 COL10A1Q03692 680 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 C1orf122Q6ZSJ8 110 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 OR51A4Q8NGJ6 313 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 OR5D13Q8NGL4 314 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 TSEN15Q8WW01 171 aaKnown RBP13.3□□□□□ -0.28
CPSF6-203ENST00000456847 TAF15Q92804 592 aaKnown RBP eCLIP13.3□□□□□ -0.28
CPSF6-203ENST00000456847 RFT1Q96AA3 541 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 SPSB1Q96BD6 273 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 OPALINQ96PE5 141 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 CHIAQ9BZP6 476 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 C8orf4Q9NR00 106 aa13.3□□□□□ -0.28
CPSF6-203ENST00000456847 IGKV1-9A0A0C4DH69 117 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 FAM181BA6NEQ2 426 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 F8VVB4 439 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 F8VWA3 439 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 ANGPTL7O43827 346 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 PAHP00439 452 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 CHRM2P08172 466 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 PIPP12273 146 aaPredicted RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 PEX2P28328 305 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 LDLRAD3Q86YD5 345 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 Q8IYB0 196 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 PNKDQ8N490 385 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 CNIH3Q8TBE1 160 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 FAM234AQ9H0X4 552 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 ANK2Q01484 3957 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 MEIOCA2RUB1 952 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 BTBD17A6NE02 478 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 TMEM212A6NML5 194 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 SPRY1O43609 319 aaPredicted RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 CLIC3O95833 236 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 IGHV4-59P01825 116 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 OMGP23515 440 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 ZNF691Q5VV52 312 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 TTC23Q5W5X9 447 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 PACRGLQ8N7B6 248 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 SETD9Q8NE22 299 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 OR5AK2Q8NH90 309 aa13.29□□□□□ -0.28
CPSF6-203ENST00000456847 UNKLQ9H9P5 680 aaKnown RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 MRPS18AQ9NVS2 196 aaKnown RBP13.29□□□□□ -0.28
CPSF6-203ENST00000456847 hCG_1809904A0A1W2PP81 198 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 A0A1W2PPE2 198 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 A0A1W2PR64 198 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 A0A1W2PRV1 198 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 IRGMA1A4Y4 181 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 WBP4O75554 376 aaKnown RBP13.28□□□□□ -0.28
CPSF6-203ENST00000456847 RPSAP08865 295 aaKnown RBP13.28□□□□□ -0.28
CPSF6-203ENST00000456847 PRKACAP17612 351 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 BCL3P20749 454 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 SAA4P35542 130 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 UBE2E1P51965 193 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 EDDM3BP56851 147 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 HAVCR2Q8TDQ0 301 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 TNFRSF14Q92956 283 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 DPAGT1Q9H3H5 408 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 FGF20Q9NP95 211 aaPredicted RBP13.28□□□□□ -0.28
CPSF6-203ENST00000456847 RBFOX1Q9NWB1 397 aaKnown RBP13.28□□□□□ -0.28
CPSF6-203ENST00000456847 DHDHQ9UQ10 334 aa13.28□□□□□ -0.28
CPSF6-203ENST00000456847 SF3B6Q9Y3B4 125 aaKnown RBP13.28□□□□□ -0.28
CPSF6-203ENST00000456847 TRBV2A0A0J9YWF9 115 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 E9PI62 339 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 K7N7A8 449 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 HAND1O96004 215 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 HCKP08631 526 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 CCL3L1P16619 93 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 TMEM200BQ69YZ2 307 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 DHRSXQ8N5I4 330 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 OR5D18Q8NGL1 313 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 SPACA5Q96QH8 159 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 PDCD1LG2Q9BQ51 273 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 ZNF649Q9BS31 505 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 ZCCHC4Q9H5U6 513 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 ZNRD1Q9P1U0 126 aa13.27□□□□□ -0.28
CPSF6-203ENST00000456847 ZFPL1O95159 310 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 CALCBP10092 127 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 MDKP21741 143 aaPredicted RBP13.27□□□□□ -0.29
CPSF6-203ENST00000456847 IER3P46695 156 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 NPBWR2P48146 333 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 RAG2P55895 527 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 EDDM3AQ14507 147 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 ZNF273Q14593 569 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 FAM58AQ8N1B3 248 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 ZNF747Q9BV97 191 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 GLS2Q9UI32 602 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 FBN3Q75N90 2809 aa13.27□□□□□ -0.29
CPSF6-203ENST00000456847 ANKRD65E5RJM6 399 aa13.26□□□□□ -0.29
CPSF6-203ENST00000456847 LIMS3P0CW19 117 aa13.26□□□□□ -0.29
CPSF6-203ENST00000456847 LIMS4P0CW20 117 aa13.26□□□□□ -0.29
CPSF6-203ENST00000456847 MYL12AP19105 171 aa13.26□□□□□ -0.29
CPSF6-203ENST00000456847 GABRR1P24046 479 aa13.26□□□□□ -0.29
CPSF6-203ENST00000456847 COX7A1P24310 79 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms