RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 BPIFB6Q8NFQ5 453 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 OR5D14Q8NGL3 314 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 GPR148Q8TDV2 347 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 TSEN15Q8WW01 171 aaKnown RBP14.29□□□□□ -0.12
USP39-208ENST00000455732 SLAMF9Q96A28 289 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 ZNF48Q96MX3 618 aaPredicted RBP14.29□□□□□ -0.12
USP39-208ENST00000455732 PCGF1Q9BSM1 259 aa14.29□□□□□ -0.12
USP39-208ENST00000455732 SEBOXQ9HB31 216 aaPredicted RBP14.29□□□□□ -0.12
USP39-208ENST00000455732 F8VVB4 439 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 F8VWA3 439 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 H0YHG0 523 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 SLC1A7O00341 560 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 SULT1B1O43704 296 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 LALBAP00709 142 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 OCM2P0CE71 109 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 OCMP0CE72 109 aaPredicted RBP14.28□□□□□ -0.12
USP39-208ENST00000455732 NDUFB7P17568 137 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 TAS2R43P59537 309 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 ARF6P62330 175 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 PDZK1IP1Q13113 114 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 PDCD1Q15116 288 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 GPR157Q5UAW9 335 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 DMKNQ6E0U4 476 aaPredicted RBP14.28□□□□□ -0.12
USP39-208ENST00000455732 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 SIGLECL1Q8N7X8 197 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 GATAD2BQ8WXI9 593 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 H1FXQ92522 213 aaKnown RBP14.28□□□□□ -0.12
USP39-208ENST00000455732 MS4A7Q9GZW8 240 aaPredicted RBP14.28□□□□□ -0.12
USP39-208ENST00000455732 FAM234AQ9H0X4 552 aa14.28□□□□□ -0.12
USP39-208ENST00000455732 SIRT4Q9Y6E7 314 aaPredicted RBP14.28□□□□□ -0.12
USP39-208ENST00000455732 IGHV3OR16-10A0A075B7F0 116 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 CYB5AP00167 134 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 C21orf33P30042 268 aaPredicted RBP14.27□□□□□ -0.13
USP39-208ENST00000455732 POU3F4P49335 361 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 UBA52P62987 128 aaKnown RBP14.27□□□□□ -0.13
USP39-208ENST00000455732 RIPK1Q13546 671 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 C6orf141Q5SZD1 244 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 RNLSQ5VYX0 342 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 SAXO1Q8IYX7 474 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 BATF2Q8N1L9 274 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 STX19Q8N4C7 294 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.13
USP39-208ENST00000455732 ANKRD60Q9BZ19 345 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 RHOFQ9HBH0 211 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 ONECUT1Q9UBC0 465 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 ZNF281Q9Y2X9 895 aa14.27□□□□□ -0.13
USP39-208ENST00000455732 SOX21Q9Y651 276 aaPredicted RBP14.27□□□□□ -0.13
USP39-208ENST00000455732 CENPVL3A0A0U1RRI6 287 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 M0R1W7 72 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 MYL12BO14950 172 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 CD2P06729 351 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 MYF6P23409 242 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 HSPA13P48723 471 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 ASPHD2Q6ICH7 369 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 METAP1DQ6UB28 335 aaPredicted RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 RBMS3Q6XE24 437 aaKnown RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 ZSCAN4Q8NAM6 433 aaPredicted RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 EMG1Q92979 244 aaKnown RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 CPNE2Q96FN4 548 aaPredicted RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 PGLYRP3Q96LB9 341 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 ELL3Q9HB65 397 aaPredicted RBP14.26□□□□□ -0.13
USP39-208ENST00000455732 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
USP39-208ENST00000455732 TRBV5-5A0A0J9YX44 114 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 TMEM89A2RUT3 159 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 ZNF737O75373 536 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 KDM4BO94953 1096 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 TK1P04183 234 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 CD1AP06126 327 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 CDK1P06493 297 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 CHRM2P08172 466 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 RAB3AP20336 220 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 BCL3P20749 454 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 NPBWR2P48146 333 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 SOX2P48431 317 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 COMPP49747 757 aaPredicted RBP14.25□□□□□ -0.13
USP39-208ENST00000455732 CAPZA1P52907 286 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 WNT4P56705 351 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 ZP1P60852 638 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 ZNF146Q15072 292 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 KISS1Q15726 138 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 YIF1BQ5BJH7 314 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 SPIN3Q5JUX0 258 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 VMO1Q7Z5L0 202 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 Q8N7P7 452 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 GHSRQ92847 366 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 SPACA5Q96QH8 159 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 PRDM13Q9H4Q3 707 aa14.25□□□□□ -0.13
USP39-208ENST00000455732 ZMAT3Q9HA38 289 aaKnown RBP14.25□□□□□ -0.13
USP39-208ENST00000455732 RBFOX1Q9NWB1 397 aaKnown RBP14.25□□□□□ -0.13
USP39-208ENST00000455732 IGHV1-69DA0A0B4J2H0 117 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 IGKV1-12A0A0C4DH73 117 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 A0A1W2PQ09 198 aa14.24□□□□□ -0.13
USP39-208ENST00000455732 DNAJC9-AS1A6NH13 148 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms