RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CSNK1A1P48729 337 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 BLKP51451 505 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SUMO3P55854 103 aaPredicted RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 FZD2Q14332 565 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF124Q15973 351 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SSX2Q16385 188 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PHLDA2Q53GA4 152 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 AKR1C8PQ5T2L2 129 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 TSPO2Q5TGU0 170 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CARD17Q5XLA6 110 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PRSS58Q8IYP2 241 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 FBXL14Q8N1E6 418 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PP6455Q8WZ26 134 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PNRC2Q9NPJ4 139 aaKnown RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 B3GAT1Q9P2W7 334 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 MKI67P46013 3256 aaKnown RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 FOXF1Q12946 379 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 MFAP5Q13361 173 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF506Q5JVG8 444 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CRIP3Q6Q6R5 217 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CYB561D1Q8N8Q1 229 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 MSI2Q96DH6 328 aaKnown RBP11.98□□□□□ -0.49
PTPRE-204ENST00000455661 VN1R1Q9GZP7 353 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SLC25A31Q9H0C2 315 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 PRO1933Q9H354 126 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 CYP8B1Q9UNU6 501 aa11.98□□□□□ -0.49
PTPRE-204ENST00000455661 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 SMCO3A2RU48 225 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FAM24AA6NFZ4 105 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 PHF1O43189 567 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 PITX3O75364 302 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 ANOS1P23352 680 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 DTYMKP23919 212 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 RRADP55042 308 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 GFERP55789 205 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FBXW4P57775 412 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 ICAM4Q14773 271 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 C1orf87Q8N0U7 546 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 PIGTQ969N2 578 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 RBMXL1Q96E39 390 aaKnown RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 Q96M66 194 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FAAP24Q9BTP7 215 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 ABHD14AQ9BUJ0 271 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 LIME1Q9H400 295 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF160Q9HCG1 818 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 SDHAF3Q9NRP4 125 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FAM86C1Q9NVL1 165 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 DHRS3O75911 302 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 HBE1P02100 147 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 GLI4P10075 376 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 FAHP16930 419 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 OPRM1P35372 400 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 LSM6P62312 80 aaKnown RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 KCNMB1Q16558 191 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 CCDC54Q8NEL0 328 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 OR10AD1Q8NGE0 317 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 GNPNAT1Q96EK6 184 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 MVB12AQ96EY5 273 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 LYZL4Q96KX0 146 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-204ENST00000455661 ANGPTL4Q9BY76 406 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 METTL9Q9H1A3 318 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 PLEKHF2Q9H8W4 249 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 UCK1Q9HA47 277 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 HSF4Q9ULV5 492 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 SLCO1B1Q9Y6L6 691 aa11.97□□□□□ -0.49
PTPRE-204ENST00000455661 CCDC187A0A096LP49 1063 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 NDUFB7P17568 137 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 FBLP22087 321 aaKnown RBP11.96□□□□□ -0.49
PTPRE-204ENST00000455661 GUCA1AP43080 201 aaPredicted RBP11.96□□□□□ -0.49
PTPRE-204ENST00000455661 RPL23AP62750 156 aaKnown RBP11.96□□□□□ -0.49
PTPRE-204ENST00000455661 HLA-DRB3P79483 266 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 TLE4Q04727 773 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 MYBPHQ13203 477 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 SMAD4Q13485 552 aaKnown RBP11.96□□□□□ -0.49
PTPRE-204ENST00000455661 OR5R1Q8NH85 324 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 SLC7A11Q9UPY5 501 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 PIGLQ9Y2B2 252 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 V9GYS6 101 aa11.96□□□□□ -0.49
PTPRE-204ENST00000455661 QDPRP09417 244 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 MYOGP15173 224 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 VAMP2P63027 116 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 DPPA2Q7Z7J5 298 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 PLPP5Q8NEB5 264 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 FRZBQ92765 325 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms