RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 MED30Q96HR3 178 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 TMED9Q9BVK6 235 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 TMEM138Q9NPI0 162 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 SF3B6Q9Y3B4 125 aaKnown RBP12.2□□□□□ -0.46
CLCN1-203ENST00000455478 MAB21L2Q9Y586 359 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 INSIG2Q9Y5U4 225 aa12.2□□□□□ -0.46
CLCN1-203ENST00000455478 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 A0A0G2JMP0 313 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 A0A0X1KG70 313 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 C22orf46C9J442 243 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 SIGLEC5O15389 551 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 MAGEB3O15480 346 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 SC5DO75845 299 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 FSTP19883 344 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 BCL3P20749 454 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 PCMT1P22061 227 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 GATA3P23771 443 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 PRDX2P32119 198 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 GABRA2P47869 451 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 PPP3R1P63098 170 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 IL13RA1P78552 427 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 DGUOKQ16854 277 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 ZNF367Q7RTV3 350 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 C1QL2Q7Z5L3 287 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 SATL1Q86VE3 508 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 PHC2Q8IXK0 858 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 ZSCAN4Q8NAM6 433 aaPredicted RBP12.19□□□□□ -0.46
CLCN1-203ENST00000455478 OR4M2Q8NGB6 313 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 NOX4Q9NPH5 578 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 RBFOX1Q9NWB1 397 aaKnown RBP12.19□□□□□ -0.46
CLCN1-203ENST00000455478 OR5V1Q9UGF6 321 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
CLCN1-203ENST00000455478 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 KIR2DS1A0A191URI9 304 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 NKX6-3A6NJ46 265 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 J3QLI3 93 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 GABRPO00591 440 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 NDUFB3O43676 98 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 KDM4BO94953 1096 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 CYB5AP00167 134 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 KNG1P01042 644 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 SFTPBP07988 381 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 TMEM225BP0DP42 221 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 BDKRB2P30411 391 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 CEBPDP49716 269 aaPredicted RBP12.18□□□□□ -0.46
CLCN1-203ENST00000455478 RPS25P62851 125 aaKnown RBP12.18□□□□□ -0.46
CLCN1-203ENST00000455478 PAX8Q06710 450 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 IKZF1Q13422 519 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 KCTD21Q4G0X4 260 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 FAM27D1Q5T7N8 215 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 CD276Q5ZPR3 534 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 ZNF773Q6PK81 442 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 TMEM91Q6ZNR0 172 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 Q8IYB0 196 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 FAM58AQ8N1B3 248 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 SVOPQ8N4V2 548 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 ZNRF1Q8ND25 227 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
CLCN1-203ENST00000455478 BEX2Q9BXY8 128 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 PPIL3Q9H2H8 161 aaKnown RBP12.18□□□□□ -0.46
CLCN1-203ENST00000455478 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 CKLFQ9UBR5 152 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 FOXJ3Q9UPW0 622 aa12.18□□□□□ -0.46
CLCN1-203ENST00000455478 CALCBP10092 127 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
CLCN1-203ENST00000455478 SSX1Q16384 188 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 C11orf91Q3C1V1 193 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 CHRFAM7AQ494W8 412 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 LRRC10Q5BKY1 277 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 ARMCX4Q5H9R4 360 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 UBE2UQ5VVX9 321 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 ASCL4Q6XD76 172 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 BTN2A1Q7KYR7 527 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 CEACAM19Q7Z692 300 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 PXT1Q8NFP0 134 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 ST8SIA4Q92187 359 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 THRSPQ92748 146 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 EMG1Q92979 244 aaKnown RBP12.17□□□□□ -0.46
CLCN1-203ENST00000455478 GPER1Q99527 375 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 NUDT16L1Q9BRJ7 211 aaKnown RBP12.17□□□□□ -0.46
CLCN1-203ENST00000455478 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
CLCN1-203ENST00000455478 HMG20AQ9NP66 347 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 OR14J1Q9UGF5 321 aa12.17□□□□□ -0.46
CLCN1-203ENST00000455478 GPR37O15354 613 aa12.16□□□□□ -0.46
CLCN1-203ENST00000455478 ECDO95905 644 aaPredicted RBP12.16□□□□□ -0.46
CLCN1-203ENST00000455478 MAS1P04201 325 aa12.16□□□□□ -0.46
CLCN1-203ENST00000455478 UCHL1P09936 223 aa12.16□□□□□ -0.46
CLCN1-203ENST00000455478 ZNF93P35789 620 aaPredicted RBP12.16□□□□□ -0.46
CLCN1-203ENST00000455478 PTGFRP43088 359 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms