RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SLC36A1Q7Z2H8 476 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 RNF144BQ7Z419 303 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 NEIL1Q96FI4 390 aaPredicted RBP11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 SDSLQ96GA7 329 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 MED30Q96HR3 178 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 ZNF488Q96MN9 340 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 FUNDC2Q9BWH2 189 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 HMG20AQ9NP66 347 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 MRPS28Q9Y2Q9 187 aaKnown RBP11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 V9GY05 133 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 ACANP16112 2415 aa11.95□□□□□ -0.5
HMGXB4-204ENST00000455359 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 LOC100506127A0A0U1RQW1 187 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 H3BUI4 141 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 SLC17A2O00624 439 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 GYPAP02724 150 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 SFTPBP07988 381 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 PSG2P11465 335 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 RAB3BP20337 219 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 BCL3P20749 454 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 NPBWR2P48146 333 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 FGF12P61328 243 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 HNRNPA0Q13151 305 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 TMEM249Q2WGJ8 235 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 NHLRC3Q5JS37 347 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 OR51T1Q8NGJ9 327 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 EMG1Q92979 244 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 ELL3Q9HB65 397 aaPredicted RBP11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 RBFOX1Q9NWB1 397 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 ZNF222Q9UK12 451 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 ING4Q9UNL4 249 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 AK6Q9Y3D8 172 aaKnown RBP11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
HMGXB4-204ENST00000455359 IGKV1D-17A0A075B6S4 117 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 IGHV3OR15-7A0A075B7D8 119 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 RFPL4AA6NLU0 287 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 B4DSR2 109 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 RFPL4AL1F8VTS6 287 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 F8VVB4 439 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 F8VWA3 439 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 ADAM20O43506 726 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 FOXH1O75593 365 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 CSTBP04080 98 aaKnown RBP11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 INHBBP09529 407 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 GTF2F2P13984 249 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 HTR2CP28335 458 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 PRDX2P32119 198 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 GMFBP60983 142 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 IL13RA1P78552 427 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 IL13RA2Q14627 380 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 RAB11BQ15907 218 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 DGUOKQ16854 277 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 AWAT2Q6E213 333 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM166AQ6J272 317 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 LINC00596Q86U02 117 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 ZNF561Q8N587 486 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 CHST4Q8NCG5 386 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 OR4D6Q8NGJ1 314 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 BCL7BQ9BQE9 202 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 CENPOQ9BU64 300 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 FAM234AQ9H0X4 552 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 CST11Q9H112 138 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 PLGRKTQ9HBL7 147 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 POLR3KQ9Y2Y1 108 aaPredicted RBP11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 DYSFO75923 2080 aa11.93□□□□□ -0.5
HMGXB4-204ENST00000455359 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 SHISA3A0PJX4 238 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 IFITM5A6NNB3 132 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 NOTOA8MTQ0 251 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 A8MXK9 166 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 AIPO00170 330 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 TMPRSS2O15393 492 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 NDUFB3O43676 98 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 GABARAPO95166 117 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CDRT1O95170 752 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 BPNT1O95861 308 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CHRM2P08172 466 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 PRKACAP17612 351 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 PITPNBP48739 271 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 HOXA4Q00056 320 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 ESCO2Q56NI9 601 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CROCCP3Q8IVE0 287 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 OSR2Q8N2R0 312 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 LINC01356Q8N9X3 169 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 SEH1LQ96EE3 360 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 CCL13Q99616 98 aa11.92□□□□□ -0.5
HMGXB4-204ENST00000455359 GFI1Q99684 422 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms