RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SMIM10L1P0DMW3 83 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 DLSTP36957 453 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SCAND1P57086 179 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 FAM78AQ5JUQ0 283 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 PRAMEF17Q5VTA0 474 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 PLPP7Q8NBV4 271 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 TM4SF19Q96DZ7 209 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SMIM10Q96HG1 83 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SLC25A21Q9BQT8 299 aaPredicted RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 MMP25Q9NPA2 562 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CKLFQ9UBR5 152 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 TRBV5-5A0A0J9YX44 114 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 OR4C45A6NMZ5 311 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CGAP01215 116 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 IGKV1D-16P01601 117 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 POLR2HP52434 150 aaKnown RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 ADAM8P78325 824 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 PAX2Q02962 417 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 LDLRAD2Q5SZI1 272 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 ZNF684Q5T5D7 378 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 FAM71F2Q6NXP2 309 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CMTM1Q8IZ96 169 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 TUBD1Q9UJT1 453 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 TMEM14AQ9Y6G1 99 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 C5orf42Q9H799 3197 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CACNA1IQ9P0X4 2223 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 DUS4LO95620 317 aaKnown RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 RENP00797 406 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 MGAT2Q10469 447 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 TMEM249Q2WGJ8 235 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 DGAT2L6Q6ZPD8 337 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 S100A7AQ86SG5 101 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CLEC1AQ8NC01 280 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 SNIP1Q8TAD8 396 aaKnown RBP8.5□□□□□ -1.05
LINC01940-201ENST00000455228 RPS4Y2Q8TD47 263 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 FAM3CQ92520 227 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 CAPNS2Q96L46 248 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 MICU1Q9BPX6 476 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 WDR76Q9H967 626 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 DECR2Q9NUI1 292 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 HIF1ANQ9NWT6 349 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 LRIT1Q9P2V4 623 aa8.5□□□□□ -1.05
LINC01940-201ENST00000455228 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ZNF736B4DX44 427 aaPredicted RBP8.49□□□□□ -1.05
LINC01940-201ENST00000455228 GAB4Q2WGN9 574 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 CSNK1A1LQ8N752 337 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 CCL4L1Q8NHW4 92 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 TSACCQ96A04 125 aaPredicted RBP8.49□□□□□ -1.05
LINC01940-201ENST00000455228 TMEM186Q96B77 213 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 DNAJA3Q96EY1 480 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ZNF319Q9P2F9 582 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
LINC01940-201ENST00000455228 MPDZO75970 2070 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 SERINC4A6NH21 518 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 DCTN6O00399 190 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 CLEC3BP05452 202 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 DHRS2Q13268 280 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 OTPQ5XKR4 325 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 FCRL6Q6DN72 434 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 OR4C3Q8NH37 302 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 GLMPQ8WWB7 406 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ASB5Q8WWX0 329 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 BCL2L2Q92843 193 aaPredicted RBP8.49□□□□□ -1.05
LINC01940-201ENST00000455228 NKD1Q969G9 470 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 RAB39BQ96DA2 213 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 DCBLD2Q96PD2 775 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 AQP10Q96PS8 301 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 CDC42EP3Q9UKI2 254 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 HEATR5AQ86XA9 2040 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PGPEP1LA6NFU8 196 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 OR5G3P0C626 314 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ESDP10768 282 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 SLC25A1P53007 311 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 AADACL3Q5VUY0 350 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 LRRC69Q6ZNQ3 347 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ZNF595Q8IYB9 648 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 CA13Q8N1Q1 262 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PLPP5Q8NEB5 264 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PPP1R1CQ8WVI7 109 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 MCHR2Q969V1 340 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 KXD1Q9BQD3 176 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PLK3Q9H4B4 646 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 ELOVL3Q9HB03 270 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 SLC2A4RGQ9NR83 387 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 PILRAQ9UKJ1 303 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 DHDHQ9UQ10 334 aa8.49□□□□□ -1.05
LINC01940-201ENST00000455228 RNF212BA8MTL3 300 aa8.48□□□□□ -1.05
LINC01940-201ENST00000455228 SLC17A2O00624 439 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms