RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CHST6Q9GZX3 395 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 FLVCR2Q9UPI3 526 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 IGKV1D-8A0A087WSZ0 117 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 A0A096LPE4 126 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 A0A1W2PPZ6 126 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 TMCC2O75069 709 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 GSTT2P0CG29 244 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 GSTT2BP0CG30 244 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 CCL2P13500 99 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ABOP16442 354 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 EGR1P18146 543 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 RAD52P43351 418 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ART1P52961 327 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 DEFA1P59665 94 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 DEFA3P59666 94 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 PCBD1P61457 104 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 BSPH1Q075Z2 132 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 MRGPRG-AS1Q2M3A8 158 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 SLC22A6Q4U2R8 563 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 TMEM244Q5VVB8 128 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 KCTD18Q6PI47 426 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 DHRS11Q6UWP2 260 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ABHD12BQ7Z5M8 362 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 LINC00528Q8N1L1 170 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 OR8G5Q8NG78 346 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 OR51D1Q8NGF3 324 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 OR51E1Q8TCB6 317 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 GIMAP1Q8WWP7 306 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.74
RIF1-207ENST00000454583 C5orf30Q96GV9 206 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 SCRT1Q9BWW7 348 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 HIPK2Q9H2X6 1198 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 EXOSC4Q9NPD3 245 aaKnown RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 GPR84Q9NQS5 396 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 OPN4Q9UHM6 478 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 HHLA2Q9UM44 414 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ALPK2Q86TB3 2170 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 OR2AT4A6NND4 320 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 XRCC2O43543 280 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 PFDN1O60925 122 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 MTRF1O75570 445 aaKnown RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 RGS11O94810 467 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 IGHV1-46P01743 117 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 SLC25A4P12235 298 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 TLE4Q04727 773 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 FOXD4Q12950 439 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 DCAF12L2Q5VW00 463 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 STUMQ69YW2 141 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 TMEM65Q6PI78 240 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 WDR82Q6UXN9 313 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 IZUMO1Q8IYV9 350 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ZSCAN4Q8NAM6 433 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 OR2AE1Q8NHA4 323 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 PP6455Q8WZ26 134 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 APOBEC3DQ96AK3 386 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 MRPL48Q96GC5 212 aaKnown RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 REEP6Q96HR9 211 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ZNF414Q96IQ9 312 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 TECTBQ96PL2 329 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 SLC6A7Q99884 636 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 ZNF436Q9C0F3 470 aaPredicted RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 MBNL3Q9NUK0 354 aaKnown RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 EIF3KQ9UBQ5 218 aaKnown RBP4.15□□□□□ -1.74
RIF1-207ENST00000454583 SLC23A1Q9UHI7 598 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 GPR160Q9UJ42 338 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 PCDHB10Q9UN67 800 aa4.15□□□□□ -1.74
RIF1-207ENST00000454583 POLEQ07864 2286 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 A0A1W2PPL8 197 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A10PA6NDY2 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A18PA6NE21 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A16PA6NEW6 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A20PA6NIJ5 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A8PA6NJQ4 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A7PA6NKC0 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A22PA8MWA6 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A12PA8MX19 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A5PA8MXJ8 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A23PA8MXZ1 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 NPIPB11E5RHQ5 1161 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 P2RY10O00398 339 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 XKRYO14609 159 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 KRT33AO76009 404 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 IGHV2-70P01814 119 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A15PP0C7V4 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A13PP0C7W8 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A14PP0C7W9 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 FAM90A24PP0C7X0 464 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 OR3A4PP47883 348 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 PPA1Q15181 289 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 PNLIPRP3Q17RR3 467 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 HCP5Q6MZN7 132 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 C3P1Q6ZMU1 363 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 C20orf204Q6ZNR8 217 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 PGAP1Q75T13 922 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 ZNF573Q86YE8 665 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 EIF4E3Q8N5X7 224 aaKnown RBP4.15□□□□□ -1.75
RIF1-207ENST00000454583 ZDHHC22Q8N966 263 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 LRTM2Q8N967 370 aa4.15□□□□□ -1.75
RIF1-207ENST00000454583 POC1AQ8NBT0 407 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms