RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 MPIG6BO95866 241 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 CD55P08174 381 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 PTHLHP12272 177 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 DUSP1P28562 367 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 TALDO1P37837 337 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ERVK11-1P61568 191 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 TLE4Q04727 773 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 IL24Q13007 206 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 PIGYQ3MUY2 71 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF787Q6DD87 383 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 CNIH2Q6PI25 160 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF573Q86YE8 665 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 PXT1Q8NFP0 134 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 OR4M1Q8NGD0 313 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 IGFBPL1Q8WX77 278 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 PKIBQ9C010 78 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 LPAR5Q9H1C0 372 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 CYSLTR2Q9NS75 346 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 C14orf119Q9NWQ9 140 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ELF5Q9UKW6 265 aaPredicted RBP9.25□□□□□ -0.93
SCN9A-205ENST00000454569 DSCAML1Q8TD84 2053 aa9.25□□□□□ -0.93
SCN9A-205ENST00000454569 MAP1AP78559 2803 aaPredicted RBP9.25□□□□□ -0.93
SCN9A-205ENST00000454569 ANKRD17O75179 2603 aaKnown RBP9.25□□□□□ -0.93
SCN9A-205ENST00000454569 FABP12A6NFH5 140 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM210A6NLX4 147 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SOCS1O15524 211 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CRTAPO75718 401 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CYB5R3P00387 301 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 PGA5P0DJD9 388 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 MGMTP16455 207 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 COL8A2P25067 703 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 UBE2NLQ5JXB2 153 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 AGAP6Q5VW22 663 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 PNLDC1Q8NA58 520 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SPERTQ8NA61 448 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 GCDHQ92947 438 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CACNG6Q9BXT2 260 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 METTL9Q9H1A3 318 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 RHBDL2Q9NX52 303 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 EXTL2Q9UBQ6 330 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 TPD52L2O43399 206 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 UPK1BO75841 260 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 GATA4P43694 442 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SRP9P49458 86 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CEBPDP49716 269 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM50BP56557 158 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SNRPD2P62316 118 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 IL18Q14116 193 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 RSU1Q15404 277 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF79Q15937 498 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ZNF181Q2M3W8 571 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 OLFML2AQ68BL7 652 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SIGIRRQ6IA17 410 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM200AQ86VY9 491 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 MKXQ8IYA7 352 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SAXO1Q8IYX7 474 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CELF2-AS1Q8N7Q2 184 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ZSCAN4Q8NAM6 433 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 Q8NFD4 153 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 OR5T2Q8NGG2 359 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 LRRC29Q8WV35 223 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 YIPF5Q969M3 257 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CMTM3Q96MX0 182 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 NRIP2Q9BQI9 281 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 CCDC32Q9BV29 185 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 SELENOIQ9C0D9 397 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ATG5Q9H1Y0 275 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ABCG5Q9H222 651 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 MS4A5Q9H3V2 200 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ABCB10Q9NRK6 738 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 NKIRAS2Q9NYR9 191 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 FBLN5Q9UBX5 448 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 NOP16Q9Y3C1 178 aaKnown RBP9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ETV7Q9Y603 341 aa9.24□□□□□ -0.93
SCN9A-205ENST00000454569 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 IGHV3OR15-7A0A075B7D8 119 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 hCG_1807616A0A1W2PRN6 198 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 FOXI3A8MTJ6 420 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 TRAPPC2LH3BP13 241 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 RAB27BO00194 218 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 GEMIN2O14893 280 aaKnown RBP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 LHBP01229 141 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 APOA1P02647 267 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 CDK2P24941 298 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 PTBP1P26599 531 aaKnown RBP eCLIP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 CD80P33681 288 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 VEGFCP49767 419 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 PPOXP50336 477 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 ART1P52961 327 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 SCAND1P57086 179 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 RPS27AP62979 156 aaKnown RBP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 TAF9Q16594 264 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 SFRP4Q6FHJ7 346 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms