RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SIRPB1O00241 398 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PSPNO60542 156 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DHRS3O75911 302 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 DNAJC8O75937 253 aaPredicted RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KRT36O76013 467 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RPP14O95059 124 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NRASP01111 189 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGLV3-1P01715 115 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 IGHV3-7P01780 117 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 APOC1P02654 83 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ALOX5APP20292 161 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PAICSP22234 425 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MAP2K3P46734 347 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 POU3F4P49335 361 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR12D2P58182 307 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RIPPLY1Q0D2K3 151 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SNCBQ16143 134 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MICAQ29983 383 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BCL2L15Q5TBC7 163 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LCN8Q6JVE9 175 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GDPD3Q7L5L3 318 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SHFQ7M4L6 423 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SSX6Q7RTT6 188 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TRAPPC6BQ86SZ2 158 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF454Q8N9F8 522 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR11H6Q8NGC7 330 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR4X2Q8NGF9 303 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR52N4Q8NGI2 321 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR13D1Q8NGV5 346 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF671Q8TAW3 534 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TFAP2CQ92754 450 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EMG1Q92979 244 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LEAP2Q969E1 77 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RFT1Q96AA3 541 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 RCC1LQ96I51 464 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 WWC2-AS2Q96NR7 200 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TBX5Q99593 518 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 B9D2Q9BPU9 175 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 APOL4Q9BPW4 351 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF286AQ9HBT8 521 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HES4Q9HCC6 221 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ABCB9Q9NP78 766 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ENPP5Q9UJA9 477 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TBL2Q9Y4P3 447 aaKnown RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TSSC4Q9Y5U2 329 aaPredicted RBP4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CSMD3Q7Z407 3707 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A0U1RQV5 110 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1B0GTI1 187 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 hCG_1809904A0A1W2PP81 198 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PPE2 198 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PPH5 198 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PR64 198 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 A0A1W2PRV1 198 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 K7N7A8 449 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HSPB6O14558 160 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GSC2O15499 205 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRODHO43272 600 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRKYO43930 277 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SRSF10O75494 262 aaKnown RBP4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HAND1O96004 215 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ALDOBP05062 364 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BCL3P20749 454 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRKACGP22612 351 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PRDX6P30041 224 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR3A1P47881 315 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR3A4PP47883 348 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NPBWR2P48146 333 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 HMGA2P52926 109 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 BLVRAP53004 296 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ERVK11-1P61568 191 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MS4A2Q01362 244 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 EGFEM1PQ0D2K5 195 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ATXN7L3Q14CW9 347 aaPredicted RBP4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GRK1Q15835 563 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SNAPC1Q16533 368 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF829Q3KNS6 432 aaPredicted RBP4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NKAPLQ5M9Q1 402 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CLVS2Q5SYC1 327 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TMEM42Q69YG0 159 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 SLC25A26Q70HW3 274 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR2W3Q7Z3T1 314 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CENPVQ7Z7K6 275 aaPredicted RBP4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 ZNF573Q86YE8 665 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 KLHL30-AS1Q8NEE0 82 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 WFDC9Q8NEX5 89 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR5A2Q8NGI9 324 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR5D18Q8NGL1 313 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 OR56B4Q8NH76 319 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 GIPC3Q8TF64 312 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CEP19Q96LK0 163 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 CLEC7AQ9BXN2 247 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 TMEM133Q9H2Q1 129 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 PLEKHA1Q9HB21 404 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MED4Q9NPJ6 270 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 MTCH1Q9NZJ7 389 aa4.76□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NUFIP1Q9UHK0 495 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms