RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PHB2Q99623 299 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 NUDT16L1Q9BRJ7 211 aaKnown RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 PDCD10Q9BUL8 212 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 GTF2A1LQ9UNN4 478 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 OSGIN2Q9Y236 505 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 A0A0G2JNJ9 132 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 OR2AT4A6NND4 320 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 MSTNO14793 375 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 COX5AP20674 150 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 UBE2NP61088 152 aaKnown RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 AVPI1Q5T686 147 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 BIVMQ86UB2 503 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 BPIFB2Q8N4F0 458 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 BCL2L2Q92843 193 aaPredicted RBP13.75□□□□□ -0.21
SNX17-204ENST00000453453 SPTSSAQ969W0 71 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 PIK3IP1Q96FE7 263 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 OR2H1Q9GZK4 316 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 Q9UFV3 132 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 SLC5A6Q9Y289 635 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 R4GMQ9 66 aa13.75□□□□□ -0.21
SNX17-204ENST00000453453 F5H0A9 414 aaPredicted RBP13.74□□□□□ -0.21
SNX17-204ENST00000453453 RAD51DO75771 328 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 LYZL6O75951 148 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 IGFBP3P17936 291 aaPredicted RBP13.74□□□□□ -0.21
SNX17-204ENST00000453453 BMP5P22003 454 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 HTR2CP28335 458 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 CX3CR1P49238 355 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 WDR38Q5JTN6 314 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 C1orf100Q5SVJ3 147 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 NKAIN3Q8N8D7 197 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 OR13C8Q8NGS7 320 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 PPP1R1CQ8WVI7 109 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
SNX17-204ENST00000453453 SAT2Q96F10 170 aaPredicted RBP13.74□□□□□ -0.21
SNX17-204ENST00000453453 ZNF75AQ96N20 296 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 MOB1AQ9H8S9 216 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
SNX17-204ENST00000453453 BSNQ9UPA5 3926 aa13.74□□□□□ -0.21
SNX17-204ENST00000453453 A0A0B4J2A0 478 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 TMEM269A0A1B0GVZ9 245 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 LOC390937A0A1W2PQ73 354 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 EEF1E1-BLOC1S5C9J1V9 151 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 HLA-AP01891 365 aaKnown RBP13.73□□□□□ -0.21
SNX17-204ENST00000453453 S100A8P05109 93 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 SMIM6P0DI80 62 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 HTR5AP47898 357 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 SLC6A9P48067 706 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 GSK3AP49840 483 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 EIF5AP63241 154 aaKnown RBP13.73□□□□□ -0.21
SNX17-204ENST00000453453 PSG4Q00888 419 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 PLP2Q04941 152 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 HIKESHIQ53FT3 197 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 ZNF774Q6NX45 483 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 TMED4Q7Z7H5 227 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 MRGPRGQ86SM5 289 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 CXorf67Q86X51 503 aaPredicted RBP13.73□□□□□ -0.21
SNX17-204ENST00000453453 ZNF584Q8IVC4 421 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 ZNF283Q8N7M2 679 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 OR5AP2Q8NGF4 316 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 OR1F12Q8NHA8 337 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 GLYATL2Q8WU03 294 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 NMES1Q9C002 83 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
SNX17-204ENST00000453453 C9orf170A2RU37 121 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 GPR31O00270 319 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 CCL21O00585 134 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 HLA-HP01893 362 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 MMP7P09237 267 aaPredicted RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 PATE4P0C8F1 98 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 LYL1P12980 280 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 RPL35P42766 123 aaKnown RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 MMP16P51512 607 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 AKR1D1P51857 326 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 GABRA6Q16445 453 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 BHLHA15Q7RTS1 189 aaPredicted RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 C17orf78Q8N4C9 275 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 OR10AC1Q8NH08 325 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 DVL3Q92997 716 aaPredicted RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 TINAGL1Q9GZM7 467 aaPredicted RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 WNT5BQ9H1J7 359 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 ZNF230Q9UIE0 474 aaPredicted RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 DHDHQ9UQ10 334 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 POMT1Q9Y6A1 747 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 OR6C6A6NF89 314 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 SYNGR3O43761 229 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 DUS4LO95620 317 aaKnown RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 ADCYAP1P18509 176 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 ATP1B3P54709 279 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 RAB1AP62820 205 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 BLOC1S1P78537 153 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 PJVKQ0ZLH3 352 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 RNASE10Q5GAN6 216 aaKnown RBP13.72□□□□□ -0.21
SNX17-204ENST00000453453 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 BAP18Q8IXM2 172 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 AKR7LQ8NHP1 331 aa13.72□□□□□ -0.21
SNX17-204ENST00000453453 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms