RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 RDH12Q96NR8 316 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 CHIAQ9BZP6 476 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 ISG20L2Q9H9L3 353 aaKnown RBP14.37□□□□□ -0.11
FAM3A-216ENST00000449971 HES4Q9HCC6 221 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 INPP5EQ9NRR6 644 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 ERVK13-1Q9NX77 482 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 MTCH1Q9NZJ7 389 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 HHLA2Q9UM44 414 aa14.37□□□□□ -0.11
FAM3A-216ENST00000449971 TRBV23-1A0A0A0MS06 115 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 OR4C45A6NMZ5 311 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 H0YAE9 185 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 IGHA1P01876 353 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 MELTFP08582 738 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 OCM2P0CE71 109 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 OCMP0CE72 109 aaPredicted RBP14.36□□□□□ -0.11
FAM3A-216ENST00000449971 ATF1P18846 271 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 EEF1B2P24534 225 aaKnown RBP14.36□□□□□ -0.11
FAM3A-216ENST00000449971 RBP2P50120 134 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 MTCP1P56278 107 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 GUCA2AQ02747 115 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 LPCAT4Q643R3 524 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 ASPHD2Q6ICH7 369 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 EGFL6Q8IUX8 553 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 SYS1Q8N2H4 156 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 OR13C3Q8NGS6 347 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 OR10AC1Q8NH08 325 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 APH1BQ8WW43 257 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 FAM96BQ9Y3D0 163 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 RNF114Q9Y508 228 aa14.36□□□□□ -0.11
FAM3A-216ENST00000449971 IGKV1-9A0A0C4DH69 117 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 F8VVB4 439 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 F8VWA3 439 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 M0R1W7 72 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 PRKACBP22694 351 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 GBX2P52951 348 aaPredicted RBP14.35□□□□□ -0.11
FAM3A-216ENST00000449971 KLRD1Q13241 179 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 RCN1Q15293 331 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 SMN1Q16637 294 aaKnown RBP14.35□□□□□ -0.11
FAM3A-216ENST00000449971 METAP1DQ6UB28 335 aaPredicted RBP14.35□□□□□ -0.11
FAM3A-216ENST00000449971 UTS2BQ765I0 119 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 DNAAF1Q8NEP3 725 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 OR4M1Q8NGD0 313 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 OR51A4Q8NGJ6 313 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 CYGBQ8WWM9 190 aa14.35□□□□□ -0.11
FAM3A-216ENST00000449971 METTL8Q9H825 291 aaKnown RBP14.35□□□□□ -0.11
FAM3A-216ENST00000449971 MRPS18AQ9NVS2 196 aaKnown RBP14.35□□□□□ -0.11
FAM3A-216ENST00000449971 E9PI62 339 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 WBP4O75554 376 aaKnown RBP14.34□□□□□ -0.11
FAM3A-216ENST00000449971 CLIC3O95833 236 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 CYB5AP00167 134 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 AZGP1P25311 298 aaKnown RBP14.34□□□□□ -0.11
FAM3A-216ENST00000449971 POU3F4P49335 361 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 RPL31P62899 125 aaKnown RBP14.34□□□□□ -0.11
FAM3A-216ENST00000449971 COL10A1Q03692 680 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 TAF9Q16594 264 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 MKXQ8IYA7 352 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
FAM3A-216ENST00000449971 TBC1D15Q8TC07 691 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 SSMEM1Q8WWF3 244 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 ZNF649Q9BS31 505 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 TCF7L1Q9HCS4 588 aa14.34□□□□□ -0.11
FAM3A-216ENST00000449971 CAB39Q9Y376 341 aaPredicted RBP14.34□□□□□ -0.11
FAM3A-216ENST00000449971 A0A1W2PPH5 198 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 ANKRD65E5RJM6 399 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 NPFFO15130 113 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 NDUFA7O95182 113 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 PRB2P02812 416 aaPredicted RBP14.33□□□□□ -0.12
FAM3A-216ENST00000449971 TK1P04183 234 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 CHRM2P08172 466 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 MRPL28Q13084 256 aaKnown RBP14.33□□□□□ -0.12
FAM3A-216ENST00000449971 ZNF691Q5VV52 312 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 TTC23Q5W5X9 447 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 NCR3LG1Q68D85 454 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 LHFPL2Q6ZUX7 228 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 PNKDQ8N490 385 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 DHRSXQ8N5I4 330 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 TMEM86BQ8N661 226 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 PACRGLQ8N7B6 248 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 OR5AK2Q8NH90 309 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 CNIH3Q8TBE1 160 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 TNFRSF14Q92956 283 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 EMG1Q92979 244 aaKnown RBP14.33□□□□□ -0.12
FAM3A-216ENST00000449971 COMMD4Q9H0A8 199 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 FGF20Q9NP95 211 aaPredicted RBP14.33□□□□□ -0.12
FAM3A-216ENST00000449971 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
FAM3A-216ENST00000449971 NBEAL2Q6ZNJ1 2754 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 ZFPL1O95159 310 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 IGHV4-59P01825 116 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 CCDC159P0C7I6 412 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 LIMS3P0CW19 117 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 LIMS4P0CW20 117 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 CALCBP10092 127 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 PEX2P28328 305 aa14.32□□□□□ -0.12
FAM3A-216ENST00000449971 UBE2E1P51965 193 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms