RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 HES4Q9HCC6 221 aa9.88□□□□□ -0.83
RFC4-208ENST00000447345 RBFOX1Q9NWB1 397 aaKnown RBP9.88□□□□□ -0.83
RFC4-208ENST00000447345 RASL12Q9NYN1 266 aa9.88□□□□□ -0.83
RFC4-208ENST00000447345 SLC25A10Q9UBX3 287 aaPredicted RBP9.88□□□□□ -0.83
RFC4-208ENST00000447345 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
RFC4-208ENST00000447345 BLOC1S6Q9UL45 172 aa9.88□□□□□ -0.83
RFC4-208ENST00000447345 LSM2Q9Y333 95 aaKnown RBP9.88□□□□□ -0.83
RFC4-208ENST00000447345 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 IGKV1-12A0A0C4DH73 117 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 TRBV5-5A0A0J9YX44 114 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 SIGLEC5O15389 551 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 NOS1APO75052 506 aaPredicted RBP9.87□□□□□ -0.83
RFC4-208ENST00000447345 IGKV1D-12P01611 117 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 ACAA1P09110 424 aaPredicted RBP9.87□□□□□ -0.83
RFC4-208ENST00000447345 TMEM225BP0DP42 221 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 NPBWR2P48146 333 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 FGF12P61328 243 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 ERVK11-1P61568 191 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 RPS11P62280 158 aaKnown RBP eCLIP9.87□□□□□ -0.83
RFC4-208ENST00000447345 PDZK1IP1Q13113 114 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 IRF3Q14653 427 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 KISS1Q15726 138 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 Q499Y3 187 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 DDI2Q5TDH0 399 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 RNLSQ5VYX0 342 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 CD276Q5ZPR3 534 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 C1QL2Q7Z5L3 287 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 MKXQ8IYA7 352 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 CD177Q8N6Q3 437 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 OR52N4Q8NGI2 321 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 C22orf15Q8WYQ4 148 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
RFC4-208ENST00000447345 GPER1Q99527 375 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 TMED9Q9BVK6 235 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 DNTTIP1Q9H147 329 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 ONECUT1Q9UBC0 465 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 MAB21L2Q9Y586 359 aa9.87□□□□□ -0.83
RFC4-208ENST00000447345 TRAV8-7A0A075B6U6 113 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 MAGEA13PA6NCF6 341 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 GABRPO00591 440 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 MAGEB3O15480 346 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 KNG1P01042 644 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 SFTPBP07988 381 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 PRKACAP17612 351 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 EPHA1P21709 976 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 DUSP1P28562 367 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 PRDX2P32119 198 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 SRSF2Q01130 221 aaKnown RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 BDH1Q02338 343 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 PAX8Q06710 450 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 INSL4Q14641 139 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 ATPAF1Q5TC12 328 aaPredicted RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 LIPKQ5VXJ0 399 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 CRIP3Q6Q6R5 217 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 PRSS48Q7RTY5 328 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 FAM58AQ8N1B3 248 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 ASCC1Q8N9N2 400 aaKnown RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 PNLDC1Q8NA58 520 aaKnown RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 NANPQ8TBE9 248 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 TNFAIP8L1Q8WVP5 186 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 MED30Q96HR3 178 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 CKLFQ9UBR5 152 aa9.86□□□□□ -0.83
RFC4-208ENST00000447345 RPUSD1Q9UJJ7 312 aaKnown RBP9.86□□□□□ -0.83
RFC4-208ENST00000447345 A0A1W2PQ09 198 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 ZNF879B4DU55 563 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 DENRO43583 198 aaKnown RBP9.85□□□□□ -0.83
RFC4-208ENST00000447345 HAND1O96004 215 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 IFNA2P01563 188 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 IGHV4-38-2P0DP08 117 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 BDKRB2P30411 391 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 OR3A4PP47883 348 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 ZP1P60852 638 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 ARF6P62330 175 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 COL10A1Q03692 680 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 PRB3Q04118 309 aaPredicted RBP9.85□□□□□ -0.83
RFC4-208ENST00000447345 ACSM1Q08AH1 577 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 KLF17Q5JT82 389 aaPredicted RBP9.85□□□□□ -0.83
RFC4-208ENST00000447345 METTL11BQ5VVY1 283 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 ZNF529Q6P280 563 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 FIP1L1Q6UN15 594 aaKnown RBP9.85□□□□□ -0.83
RFC4-208ENST00000447345 Q8IYB0 196 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 FAM185AQ8N0U4 392 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 ZNF561Q8N587 486 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 UFD1Q92890 307 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 CPNE2Q96FN4 548 aaPredicted RBP9.85□□□□□ -0.83
RFC4-208ENST00000447345 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 DERL3Q96Q80 235 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 DCTN5Q9BTE1 182 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 NOX4Q9NPH5 578 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 TMEM138Q9NPI0 162 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 GSTK1Q9Y2Q3 226 aa9.85□□□□□ -0.83
RFC4-208ENST00000447345 TRBV5-7A0A0A0MS05 114 aa9.84□□□□□ -0.83
RFC4-208ENST00000447345 MEX3AA1L020 520 aaKnown RBP9.84□□□□□ -0.83
RFC4-208ENST00000447345 SIRPB1O00241 398 aa9.84□□□□□ -0.83
RFC4-208ENST00000447345 TOX4O94842 621 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms