RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TMEM17Q86X19 198 aa14.98□□□□□ -0.01
SMC6-206ENST00000446852 CASTOR1Q8WTX7 329 aa14.98□□□□□ -0.01
SMC6-206ENST00000446852 HS3ST6Q96QI5 342 aa14.98□□□□□ -0.01
SMC6-206ENST00000446852 APC2O95996 2303 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR5H14A6NHG9 310 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 PDCD6O75340 191 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 FCGR3AP08637 254 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 FPR2P25090 351 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 HTR2BP41595 481 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR2T2Q6IF00 324 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 TEX261Q6UWH6 196 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR5P3Q8WZ94 311 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 RTBDNQ9BSG5 229 aaPredicted RBP14.97□□□□□ -0.01
SMC6-206ENST00000446852 PCDHB16Q9NRJ7 776 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 ANXA10Q9UJ72 324 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 U3KQ87 197 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 FAM221AA4D161 298 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 PPP3CBP16298 524 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 COX5AP20674 150 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
SMC6-206ENST00000446852 IL32P24001 234 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 ZNF585AQ6P3V2 769 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 Q6ZPA2 131 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 Q6ZS92 163 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 TMEM185AQ8NFB2 350 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR5A2Q8NGI9 324 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR5L1Q8NGL2 311 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 OR6K3Q8NGY3 331 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 MTCH1Q9NZJ7 389 aa14.97□□□□□ -0.01
SMC6-206ENST00000446852 PROB1E7EW31 1015 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 SMPD2O60906 423 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 DUS4LO95620 317 aaKnown RBP14.96□□□□□ -0.01
SMC6-206ENST00000446852 CNOT4O95628 575 aaKnown RBP14.96□□□□□ -0.01
SMC6-206ENST00000446852 DTYMKP23919 212 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 TAS2R31P59538 309 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 SEC61A1P61619 476 aaKnown RBP14.96□□□□□ -0.01
SMC6-206ENST00000446852 TMEM128Q5BJH2 165 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 SAXO1Q8IYX7 474 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 ASB13Q8WXK3 278 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 PHB2Q99623 299 aa14.96□□□□□ -0.01
SMC6-206ENST00000446852 DPCDQ9BVM2 203 aaPredicted RBP14.96□□□□□ -0.01
SMC6-206ENST00000446852 ANKRD30BLA7E2S9 258 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 AHRRA9YTQ3 701 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 MCRIP1C9JLW8 97 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 RRP8O43159 456 aaKnown RBP14.95□□□□□ -0.02
SMC6-206ENST00000446852 OR7C1O76099 320 aaPredicted RBP14.95□□□□□ -0.02
SMC6-206ENST00000446852 ARPC4P59998 168 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 SORDQ00796 357 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 CCDC120Q96HB5 630 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 IL36RNQ9UBH0 155 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 EDARQ9UNE0 448 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 TRAV14DV4A0A0A6YYC5 116 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 ARPC5O15511 151 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 SYNGR1O43759 233 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 NOS1APO75052 506 aaPredicted RBP14.95□□□□□ -0.02
SMC6-206ENST00000446852 TNFSF13O75888 250 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 HLA-GP17693 338 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 ERVS71-1P61550 626 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 SUPT4H1P63272 117 aaKnown RBP14.95□□□□□ -0.02
SMC6-206ENST00000446852 IGFBP7Q16270 282 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 NSUN5P2Q63ZY6 315 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 ELP2Q6IA86 826 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 OR2A2Q6IF42 318 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 LPCAT3Q6P1A2 487 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 SEM1Q6ZVN7 128 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 TMEM200AQ86VY9 491 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 CCDC36Q8IYA8 594 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 ZNF680Q8NEM1 530 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 SNIP1Q8TAD8 396 aaKnown RBP14.95□□□□□ -0.02
SMC6-206ENST00000446852 MPC1Q9Y5U8 109 aa14.95□□□□□ -0.02
SMC6-206ENST00000446852 FXYD6-FXYD2A0A087WZ82 144 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 HMSDA8MTL9 139 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 CD8AP01732 235 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 FUT3P21217 361 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 CA6P23280 308 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 SRSF4Q08170 494 aaKnown RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 ZNF660Q6AZW8 331 aaPredicted RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 RBMXL3Q8N7X1 1067 aaKnown RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 HIST1H2AAQ96QV6 131 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 FXYD6Q9H0Q3 95 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 LIME1Q9H400 295 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 DBX1A6NMT0 343 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 L7N2F9 121 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 GLRA1P23415 457 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 FGF12P61328 243 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 INO80CQ6PI98 192 aaPredicted RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 HAGHLQ6PII5 290 aaPredicted RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 FBXW12Q6X9E4 464 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 KCTD9Q7L273 389 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 MARS2Q96GW9 593 aaKnown RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 ZNF2Q9BSG1 426 aaPredicted RBP14.94□□□□□ -0.02
SMC6-206ENST00000446852 C1QTNF6Q9BXI9 259 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 OR2J1Q9GZK6 312 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 CDH20Q9HBT6 801 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 LUZP4Q9P127 313 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 SHANK1Q9Y566 2161 aa14.94□□□□□ -0.02
SMC6-206ENST00000446852 J3QW42 95 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 ERVH48-1M5A8F1 160 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 PPP1CBP62140 327 aa14.93□□□□□ -0.02
SMC6-206ENST00000446852 OPCMLQ14982 345 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms