RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SH3BGRL2Q9UJC5 107 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 RNF24Q9Y225 148 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 CBR3O75828 277 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 TIMP1P01033 207 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 APCSP02743 223 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 TTRP02766 147 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 WFDC6Q9BQY6 131 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 RND3P61587 244 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 Q6ZNB5 142 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 HOGA1Q86XE5 327 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 MSI2Q96DH6 328 aaKnown RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 TSPAN32Q96QS1 320 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 MBD1Q9UIS9 605 aaPredicted RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 TRAV14DV4A0A0A6YYC5 116 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 IL2RAP01589 272 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 RAB7AP51149 207 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ATP6V1FQ16864 119 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ARRDC3Q96B67 414 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 AGAP20933 346 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 H2BFWTQ7Z2G1 175 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ATAD5Q96QE3 1844 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 FAM3BP58499 235 aaPredicted RBP7.01□□□□□ -1.29
SMG1-202ENST00000446231 SP3Q02447 781 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 TMEM267Q0VDI3 215 aaPredicted RBP7.01□□□□□ -1.29
SMG1-202ENST00000446231 OR4N2Q8NGD1 307 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 MRPL37Q9BZE1 423 aaKnown RBP7.01□□□□□ -1.29
SMG1-202ENST00000446231 CDK5RAP2Q96SN8 1893 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ZNF684Q5T5D7 378 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 OR5AU1Q8NGC0 362 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 CLDN16Q9Y5I7 305 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 RELQ04864 619 aaPredicted RBP7.01□□□□□ -1.29
SMG1-202ENST00000446231 KLHDC7BQ96G42 594 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 SHDQ96IW2 340 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ABI3Q9P2A4 366 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 DAPP1Q9UN19 280 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 HSPB6O14558 160 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 CRISP2P16562 243 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 GGTLC2Q14390 218 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 OIT3Q8WWZ8 545 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 APOOQ9BUR5 198 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ZNF708P17019 499 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ZNF611Q8N823 705 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 OR2AE1Q8NHA4 323 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 NT5CQ8TCD5 201 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 WIPI2Q9Y4P8 454 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 HKR1P10072 659 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 PLEK2Q9NYT0 353 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 PIN1P1O15428 100 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ACTL6AO96019 429 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 BRS3P32247 399 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 HERPUD1Q15011 391 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 ALOX12BO75342 701 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 RAB35Q15286 201 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 GNG12Q9UBI6 72 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 PPIL1Q9Y3C6 166 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 EFSO43281 561 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 CHST1O43916 411 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 CTLA4P16410 223 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 DYNLT3P51808 116 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 BSXQ3C1V8 233 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 LIPHQ8WWY8 451 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 RRP8O43159 456 aaKnown RBP7.01□□□□□ -1.29
SMG1-202ENST00000446231 DEDDO75618 318 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 FGF5P12034 268 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 SLC35E1Q96K37 410 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 TRIB1Q96RU8 372 aa7.01□□□□□ -1.29
SMG1-202ENST00000446231 CYB5R3P00387 301 aaPredicted RBP7□□□□□ -1.29
SMG1-202ENST00000446231 MPZP25189 248 aa7□□□□□ -1.29
SMG1-202ENST00000446231 TMEM50BP56557 158 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ROBO4Q8WZ75 1007 aa7□□□□□ -1.29
SMG1-202ENST00000446231 TSPO2Q5TGU0 170 aa7□□□□□ -1.29
SMG1-202ENST00000446231 MMACHCQ9Y4U1 282 aa7□□□□□ -1.29
SMG1-202ENST00000446231 FZD5Q13467 585 aa7□□□□□ -1.29
SMG1-202ENST00000446231 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
SMG1-202ENST00000446231 TCN2P20062 427 aa7□□□□□ -1.29
SMG1-202ENST00000446231 MRPL49Q13405 166 aaKnown RBP7□□□□□ -1.29
SMG1-202ENST00000446231 OR4B1Q8NGF8 309 aa7□□□□□ -1.29
SMG1-202ENST00000446231 C11orf40Q8WZ69 217 aa7□□□□□ -1.29
SMG1-202ENST00000446231 SMIM8Q96KF7 97 aa7□□□□□ -1.29
SMG1-202ENST00000446231 FUT3P21217 361 aa7□□□□□ -1.29
SMG1-202ENST00000446231 OR3A4PP47883 348 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ERVFRD-1P60508 538 aa7□□□□□ -1.29
SMG1-202ENST00000446231 VN1R2Q8NFZ6 395 aa7□□□□□ -1.29
SMG1-202ENST00000446231 DEFB118Q96PH6 123 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ANKRD10Q9NXR5 420 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ZNF141Q15928 474 aa7□□□□□ -1.29
SMG1-202ENST00000446231 TOPAZ1Q8N9V7 1692 aa7□□□□□ -1.29
SMG1-202ENST00000446231 KIAA1324LA8MWY0 1029 aaPredicted RBP7□□□□□ -1.29
SMG1-202ENST00000446231 SLC38A11Q08AI6 406 aa7□□□□□ -1.29
SMG1-202ENST00000446231 ELOBQ15370 118 aa7□□□□□ -1.29
SMG1-202ENST00000446231 MRPL21Q7Z2W9 205 aaKnown RBP7□□□□□ -1.29
SMG1-202ENST00000446231 OTX2P32243 289 aa7□□□□□ -1.29
SMG1-202ENST00000446231 A0A1B0GTI1 187 aa7□□□□□ -1.29
SMG1-202ENST00000446231 C9J4A7 227 aa7□□□□□ -1.29
SMG1-202ENST00000446231 OR5G3P0C626 314 aa7□□□□□ -1.29
SMG1-202ENST00000446231 TSTD1Q8NFU3 115 aa7□□□□□ -1.29
SMG1-202ENST00000446231 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
SMG1-202ENST00000446231 RFLNBQ8N5W9 214 aa7□□□□□ -1.29
SMG1-202ENST00000446231 BCORQ6W2J9 1755 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms