RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RSU1Q15404 277 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 LUZP4Q9P127 313 aa12.39□□□□□ -0.43
ERCC3-203ENST00000445889 SERPINE3A8MV23 424 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 PRF1P14222 555 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 RNF212Q495C1 297 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 HAS2Q92819 552 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 PRRC2CQ9Y520 2896 aaKnown RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF728P0DKX0 622 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 ZFP62Q8NB50 900 aaPredicted RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 RASL10BQ96S79 203 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 KCNIP3Q9Y2W7 256 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 ASPMQ8IZT6 3477 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 NPIPB13A6NJU9 1138 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 NPIPB4C9JG80 1138 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 SCRG1O75711 98 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 CCL1P22362 96 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 RAET1LQ5VY80 246 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 P4HTMQ9NXG6 502 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
ERCC3-203ENST00000445889 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
ERCC3-203ENST00000445889 BORCS7-ASMTA0A0B4J1R7 106 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 E5RGE8 158 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-203ENST00000445889 MSR1P21757 451 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 NXPH1P58417 271 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
ERCC3-203ENST00000445889 SLC35A1P78382 337 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 FAM189A2Q15884 450 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 SMRP1Q8NCR6 262 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 CHST5Q9GZS9 411 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 NSG2Q9Y328 171 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 HSPB6O14558 160 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 TMEM187Q14656 261 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 SURF2Q15527 256 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF343Q6P1L6 599 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 SLC22A8Q8TCC7 542 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 OR51M1Q9H341 326 aa12.37□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 IGHV2-5P01817 119 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 LCATP04180 440 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 GLB1P16278 677 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 HMGN3Q15651 99 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF239Q16600 458 aaKnown RBP12.36□□□□□ -0.43
ERCC3-203ENST00000445889 HAGHQ16775 308 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 C9orf152Q5JTZ5 239 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 CDPF1Q6NVV7 123 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 FBXL14Q8N1E6 418 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 Q96M66 194 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 IGKV1-12A0A0C4DH73 117 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 AP4M1O00189 453 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 NDUFS6O75380 124 aaKnown RBP12.36□□□□□ -0.43
ERCC3-203ENST00000445889 OR2C1O95371 312 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 IGKV1D-12P01611 117 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 P4HA3Q7Z4N8 544 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 TP53RKQ96S44 253 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
ERCC3-203ENST00000445889 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-203ENST00000445889 ZFAND5O76080 213 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 CST7O76096 145 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 SEC11BP0C7V7 166 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 PAX6P26367 422 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 EIF2S3P41091 472 aaKnown RBP12.35□□□□□ -0.43
ERCC3-203ENST00000445889 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 SOHLH1Q5JUK2 328 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-203ENST00000445889 Q6ZPA2 131 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 OR10AD1Q8NGE0 317 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 OR1J1Q8NGS3 322 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 NPIPA2E9PIF3 369 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 NPIPA3F8WFD2 350 aa12.35□□□□□ -0.43
ERCC3-203ENST00000445889 TNFSF11O14788 317 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms