RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 KLHL22Q53GT1 634 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 NCR3LG1Q68D85 454 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 C16orf87Q6PH81 154 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 METAP1DQ6UB28 335 aaPredicted RBP17.27■□□□□ 0.36
CDKN3-204ENST00000442975 FIP1L1Q6UN15 594 aaKnown RBP17.27■□□□□ 0.36
CDKN3-204ENST00000442975 UTS2BQ765I0 119 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 DNAAF1Q8NEP3 725 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 TSEN15Q8WW01 171 aaKnown RBP17.27■□□□□ 0.36
CDKN3-204ENST00000442975 SPSB1Q96BD6 273 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 OPALINQ96PE5 141 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 CHIAQ9BZP6 476 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 COMMD4Q9H0A8 199 aa17.27■□□□□ 0.36
CDKN3-204ENST00000442975 FAM181BA6NEQ2 426 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 E9PI62 339 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 ANGPTL7O43827 346 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 IGHV4-59P01825 116 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 TK1P04183 234 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 CCDC159P0C7I6 412 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 OMGP23515 440 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 SNU13P55769 128 aaKnown RBP17.26■□□□□ 0.35
CDKN3-204ENST00000442975 MRPL28Q13084 256 aaKnown RBP17.26■□□□□ 0.35
CDKN3-204ENST00000442975 ZNF691Q5VV52 312 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 LHFPL2Q6ZUX7 228 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 EGFL6Q8IUX8 553 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 PDCD1LG2Q9BQ51 273 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 NEK6Q9HC98 313 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 RBFOX1Q9NWB1 397 aaKnown RBP17.26■□□□□ 0.35
CDKN3-204ENST00000442975 IL36RNQ9UBH0 155 aa17.26■□□□□ 0.35
CDKN3-204ENST00000442975 CAB39Q9Y376 341 aaPredicted RBP17.26■□□□□ 0.35
CDKN3-204ENST00000442975 A0A1W2PPH5 198 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 MEIOCA2RUB1 952 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 TMEM212A6NML5 194 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 SPRY1O43609 319 aaPredicted RBP17.25■□□□□ 0.35
CDKN3-204ENST00000442975 ZFPL1O95159 310 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 PAHP00439 452 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 FBP1P09467 338 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 CALCBP10092 127 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 BCL3P20749 454 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 SAA4P35542 130 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 C1orf122Q6ZSJ8 110 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 MKXQ8IYA7 352 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 TMEM86BQ8N661 226 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 PACRGLQ8N7B6 248 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 OR5D18Q8NGL1 313 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 OR5D13Q8NGL4 314 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 OR5AK2Q8NH90 309 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 TBC1D15Q8TC07 691 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 TNFRSF14Q92956 283 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 SPACA5Q96QH8 159 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 ZNF649Q9BS31 505 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 C8orf4Q9NR00 106 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 MRPS18AQ9NVS2 196 aaKnown RBP17.25■□□□□ 0.35
CDKN3-204ENST00000442975 DHDHQ9UQ10 334 aa17.25■□□□□ 0.35
CDKN3-204ENST00000442975 MEX3AA1L020 520 aaKnown RBP17.24■□□□□ 0.35
CDKN3-204ENST00000442975 CRYBA1P05813 215 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 LIMS3P0CW19 117 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 LIMS4P0CW20 117 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 CCL3L1P16619 93 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 NPBWR2P48146 333 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 EDDM3BP56851 147 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 EDDM3AQ14507 147 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 ZNF273Q14593 569 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 TTC23Q5W5X9 447 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 TMEM200BQ69YZ2 307 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 LDLRAD3Q86YD5 345 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 Q8IYB0 196 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 SETD9Q8NE22 299 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 FAM234AQ9H0X4 552 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 POMT1Q9Y6A1 747 aa17.24■□□□□ 0.35
CDKN3-204ENST00000442975 TRBV2A0A0J9YWF9 115 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 HAND1O96004 215 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 CHRM2P08172 466 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 HCKP08631 526 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 PRKACAP17612 351 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 MYL12AP19105 171 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 GABRR1P24046 479 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 COX7A1P24310 79 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 DUSP1P28562 367 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 UBE2E1P51965 193 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 GTF2A1P52655 376 aaPredicted RBP17.23■□□□□ 0.35
CDKN3-204ENST00000442975 GDPD3Q7L5L3 318 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 DHRSXQ8N5I4 330 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 ZCCHC4Q9H5U6 513 aa17.23■□□□□ 0.35
CDKN3-204ENST00000442975 UNKLQ9H9P5 680 aaKnown RBP17.23■□□□□ 0.35
CDKN3-204ENST00000442975 FGF20Q9NP95 211 aaPredicted RBP17.23■□□□□ 0.35
CDKN3-204ENST00000442975 IRGMA1A4Y4 181 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 BTBD17A6NE02 478 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 K7N7A8 449 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 ZNF737O75373 536 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 ETV1P50549 477 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 PDZK1IP1Q13113 114 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 ZNF782Q6ZMW2 699 aaPredicted RBP17.22■□□□□ 0.35
CDKN3-204ENST00000442975 FAM58AQ8N1B3 248 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 HAVCR2Q8TDQ0 301 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 JAM3Q9BX67 310 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 CHST6Q9GZX3 395 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 ZNRD1Q9P1U0 126 aa17.22■□□□□ 0.35
CDKN3-204ENST00000442975 SF3B6Q9Y3B4 125 aaKnown RBP17.22■□□□□ 0.35
CDKN3-204ENST00000442975 hCG_1809904A0A1W2PP81 198 aa17.21■□□□□ 0.35
CDKN3-204ENST00000442975 A0A1W2PPE2 198 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 383.1 ms