RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 YTHDF1Q9BYJ9 559 aaKnown RBP12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 TMEM138Q9NPI0 162 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 SLC25A10Q9UBX3 287 aaPredicted RBP12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 MAB21L2Q9Y586 359 aa12.46□□□□□ -0.41
CSNK1E-210ENST00000442216 A0A1B0GW55 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 KDM4BO94953 1096 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 PLATP00750 562 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 FSHBP01225 129 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L2P0CJ85 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L3P0CJ86 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L4P0CJ87 422 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L5P0CJ88 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L6P0CJ89 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L7P0CJ90 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 IGFBP3P17936 291 aaPredicted RBP12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 FSTP19883 344 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 MAPK3P27361 379 aaPredicted RBP12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 PRDX2P32119 198 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 ZP1P60852 638 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 PPP3R1P63098 170 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 IKZF1Q13422 519 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DOC2BQ14184 412 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DGUOKQ16854 277 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 ASPHD2Q6ICH7 369 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 CD177Q8N6Q3 437 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 UPRTQ96BW1 309 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 TAS2R4Q9NYW5 299 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 CKLFQ9UBR5 152 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 FOXJ3Q9UPW0 622 aa12.45□□□□□ -0.42
CSNK1E-210ENST00000442216 TRBV5-7A0A0A0MS05 114 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 ZNF879B4DU55 563 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 SPRY1O43609 319 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 CHRM2P08172 466 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 EEF1B2P24534 225 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 BDKRB2P30411 391 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 BMXP51813 675 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 ZNF146Q15072 292 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 TBCEQ15813 527 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 ARMCX4Q5H9R4 360 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 SPIN3Q5JUX0 258 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 FAM58AQ8N1B3 248 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 PXT1Q8NFP0 134 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 OR51A2Q8NGJ7 313 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 OR13C5Q8NGS8 318 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 EMG1Q92979 244 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 RFT1Q96AA3 541 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 SPACA5Q96QH8 159 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 OR14A2Q96R54 314 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 CCDC90BQ9GZT6 254 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 CNTD2Q9H8S5 307 aa12.44□□□□□ -0.42
CSNK1E-210ENST00000442216 ZFHX3Q15911 3703 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 TRBV23-1A0A0A0MS06 115 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 F8VVB4 439 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 F8VWA3 439 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 SELLP14151 372 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 ADRA2CP18825 462 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 BCL3P20749 454 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 TGFBR2P37173 567 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 NPBWR2P48146 333 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 TPBGQ13641 420 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 TRAM1Q15629 374 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 UNQ9370/PRO34162Q6UXP9 181 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 CDH26Q8IXH8 852 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 TMEM185AQ8NFB2 350 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 UFD1Q92890 307 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 DERL3Q96Q80 235 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 HMG20AQ9NP66 347 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 GLS2Q9UI32 602 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-210ENST00000442216 IGKV1-12A0A0C4DH73 117 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 K7N7A8 449 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 ANGPTL7O43827 346 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 IGKV1D-12P01611 117 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 TFF1P04155 84 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 TMEM225BP0DP42 221 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 NDUFB7P17568 137 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 ZNF93P35789 620 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 MTNR1BP49286 362 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 BPIFB3P59826 476 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 METTL11BQ5VVY1 283 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 ASCL4Q6XD76 172 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 C1orf122Q6ZSJ8 110 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 RNF144BQ7Z419 303 aa12.42□□□□□ -0.42
CSNK1E-210ENST00000442216 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms