RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ITFG1Q8TB96 612 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 CASTOR1Q8WTX7 329 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 STMN2Q93045 179 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 TM4SF18Q96CE8 201 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 DYNLL2Q96FJ2 89 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 MCHR1Q99705 422 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 LITAFQ99732 161 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 C1orf50Q9BV19 199 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 ABCG5Q9H222 651 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 GNG8Q9UK08 70 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 JPT1Q9UK76 154 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 SAMD4AQ9UPU9 718 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 PSG8Q9UQ74 426 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 RGPD1P0DJD0 1748 aa3.25□□□□□ -1.89
CDC42BPA-207ENST00000441725 DICER1Q9UPY3 1922 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 IGKV2D-30A0A075B6S6 120 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 A0A0G2JMP0 313 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 A0A0X1KG70 313 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 C15orf65H3BRN8 121 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SULT2B1O00204 365 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 MPDU1O75352 247 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 LGALS2P05162 132 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SERPINA7P05543 415 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 HPNP05981 417 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 LIMS3P0CW19 117 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 LIMS4P0CW20 117 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 GPX2P18283 190 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ALOX5APP20292 161 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 PAFAH1B2P68402 229 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TWF1Q12792 350 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 LY6DQ14210 128 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC10A1Q14973 349 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ATAD3CQ5T2N8 411 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SMARCD3Q6STE5 483 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 GLT6D1Q7Z4J2 308 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 KLHDC8BQ8IXV7 354 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR10G9Q8NGN4 311 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR10A6Q8NH74 314 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 HAVCR2Q8TDQ0 301 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 DNASE2BQ8WZ79 361 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 RGP1Q92546 391 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 MRPS31Q92665 395 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OXGR1Q96P68 337 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TBL1XR1Q9BZK7 514 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 RBKSQ9H477 322 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CLMPQ9H6B4 373 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 REEP4Q9H6H4 257 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 NIPAL2Q9H841 368 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TAS2R13Q9NYV9 303 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CPSF1Q10570 1443 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 NUP188Q5SRE5 1749 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF609O15014 1411 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SMG6Q86US8 1419 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 RIMS2Q9UQ26 1411 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 IGHV3-16A0A0C4DH30 117 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR5H14A6NHG9 310 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SEC14L6B5MCN3 397 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 PPP5D1E7EU14 171 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 HAND1O96004 215 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 IFNA1P01562 189 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 IGLV1-44P01699 117 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 THY1P04216 161 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR56A5P0C7T3 313 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CD37P11049 281 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ABOP16442 354 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 F2RP25116 425 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SELENOTP62341 195 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC35B1P78383 322 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 BTN3A2P78410 334 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TCP10Q12799 353 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF235Q14590 738 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CDK10Q15131 360 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TSNQ15631 228 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 LRRC75BQ2VPJ9 315 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 VWA2Q5GFL6 755 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 TCTEX1D4Q5JR98 221 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 GPRC6AQ5T6X5 926 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 C9orf66Q5T8R8 295 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CPTPQ5TA50 214 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 FAM71E1Q6IPT2 247 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 RNF165Q6ZSG1 346 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 NIT1Q86X76 327 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CATSPER3Q86XQ3 398 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC30A8Q8IWU4 369 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC35F6Q8N357 371 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR1S2Q8NGQ3 325 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 OR5J2Q8NH18 312 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SYNPRQ8TBG9 265 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 SLC7A13Q8TCU3 470 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZPLD1Q8TCW7 415 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 Q8WTZ3 238 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF385DQ9H6B1 395 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 METTL17Q9H7H0 456 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 ZNF696Q9H7X3 374 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 PRSS21Q9Y6M0 314 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 CUL9Q8IWT3 2517 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 RREB1Q92766 1687 aa3.24□□□□□ -1.89
CDC42BPA-207ENST00000441725 DLC1Q96QB1 1528 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms