RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FXYD5Q96DB9 178 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 OR2M4Q96R27 311 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 CHID1Q9BWS9 393 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 CHRNA10Q9GZZ6 450 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 SLC38A1Q9H2H9 487 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 TDRD3Q9H7E2 651 aaKnown RBP2.18□□□□□ -2.06
PFDN4-202ENST00000441080 PARP11Q9NR21 331 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 TAC3Q9UHF0 121 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 ZNF780BQ9Y6R6 833 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 LOXHD1Q8IVV2 1947 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 ZNF407Q9C0G0 2248 aa2.18□□□□□ -2.06
PFDN4-202ENST00000441080 TRAV8-7A0A075B6U6 113 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 ANKRD20A5PA0PJZ0 165 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 GMNCA6NCL1 334 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 H3BQ85 93 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 TCAPO15273 167 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 GATCO43716 136 aaKnown RBP2.17□□□□□ -2.06
PFDN4-202ENST00000441080 SNAI1O95863 264 aaPredicted RBP2.17□□□□□ -2.06
PFDN4-202ENST00000441080 PRPS1L1P21108 318 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 ARR3P36575 388 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 SYT6Q5T7P8 510 aaPredicted RBP2.17□□□□□ -2.06
PFDN4-202ENST00000441080 SMARCD3Q6STE5 483 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 ASCL4Q6XD76 172 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 LY6G5BQ8NDX9 201 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 OR4A15Q8NGL6 344 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 IGF2BP2-AS1Q96M15 143 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 RILPQ96NA2 401 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 SRRQ9GZT4 340 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 ASB7Q9H672 318 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 MCTS1Q9ULC4 181 aaKnown RBP2.17□□□□□ -2.06
PFDN4-202ENST00000441080 FLVCR2Q9UPI3 526 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 AP3M1Q9Y2T2 418 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 ACOT9Q9Y305 439 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 TRAPPC1Q9Y5R8 145 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 AQRO60306 1485 aaKnown RBP eCLIP2.17□□□□□ -2.061e-7■■■■■ 26.9
PFDN4-202ENST00000441080 SIGLEC1Q9BZZ2 1709 aa2.17□□□□□ -2.06
PFDN4-202ENST00000441080 CACNA1DQ01668 2161 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 DHX57Q6P158 1386 aaKnown RBP2.16□□□□□ -2.06
PFDN4-202ENST00000441080 IGKV1OR2-108A0A075B7D4 117 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 CPSF4O95639 269 aaKnown RBP2.16□□□□□ -2.06
PFDN4-202ENST00000441080 ENDOGQ14249 297 aaKnown RBP2.16□□□□□ -2.06
PFDN4-202ENST00000441080 STK38Q15208 465 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 TAL2Q16559 108 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 NELFCDQ8IXH7 590 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 CA13Q8N1Q1 262 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 OR8A1Q8NGG7 326 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 OR8S1Q8NH09 359 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 UBA3Q8TBC4 463 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 SHCBP1LQ9BZQ2 653 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 ICOSQ9Y6W8 199 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 V9GYY9 64 aa2.16□□□□□ -2.06
PFDN4-202ENST00000441080 BAZ1BQ9UIG0 1483 aaKnown RBP2.15□□□□□ -2.06
PFDN4-202ENST00000441080 ZNF878C9JN71 531 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 AQP9O43315 295 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 SLC37A4O43826 429 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 GMDSO60547 372 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 IGHMP01871 453 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 LIPCP11150 499 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 PTHLHP12272 177 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 TGFBR2P37173 567 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 P2RY2P41231 377 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 FOXA1P55317 472 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 TNFRSF9Q07011 255 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 DYNC1I2Q13409 638 aaKnown RBP2.15□□□□□ -2.07
PFDN4-202ENST00000441080 SSX1Q16384 188 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
PFDN4-202ENST00000441080 ZNF404Q494X3 552 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 ATP6AP1LQ52LC2 224 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 CLLU1OSQ5K130 101 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 UGT2A3Q6UWM9 527 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 CLEC18BQ6UXF7 455 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 C22orf15Q8WYQ4 148 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 QKIQ96PU8 341 aaKnown RBP eCLIP2.15□□□□□ -2.07
PFDN4-202ENST00000441080 BCL7BQ9BQE9 202 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 GAL3ST2Q9H3Q3 398 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 WDR55Q9H6Y2 383 aaPredicted RBP2.15□□□□□ -2.07
PFDN4-202ENST00000441080 C12orf4Q9NQ89 552 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 SDHAF3Q9NRP4 125 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 ANXA10Q9UJ72 324 aa2.15□□□□□ -2.07
PFDN4-202ENST00000441080 LOC389332A0A1B0GUA5 103 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 TVP23AA6NH52 213 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 K7EPK0 472 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 ZNF593O00488 134 aaPredicted RBP2.14□□□□□ -2.07
PFDN4-202ENST00000441080 KDELR3O43731 214 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 SYNGR2O43760 224 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 IGHV3-53P01767 116 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 RLN2P04090 185 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 STAG3L2P0CL84 134 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 TAC1P20366 129 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 GPR4P46093 362 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 GZMMP51124 257 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 TMEM241Q24JQ0 296 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 C16orf87Q6PH81 154 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 LINC00596Q86U02 117 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 AMN1Q8IY45 258 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 TSGA10Q9BZW7 698 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 MMACHCQ9Y4U1 282 aa2.14□□□□□ -2.07
PFDN4-202ENST00000441080 PRR14LQ5THK1 2151 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms