RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 RFPL4AL1F8VTS6 287 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 ANGPTL7O43827 346 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 ALX3O95076 343 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 CYB5AP00167 134 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 IGKV1D-12P01611 117 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 CALCBP10092 127 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 RAB3AP20336 220 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 BCL3P20749 454 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 NPBWR2P48146 333 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 FGF12P61328 243 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 ACSM1Q08AH1 577 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 C11orf91Q3C1V1 193 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 YIF1BQ5BJH7 314 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 LRRC10Q5BKY1 277 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 ZNF529Q6P280 563 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 ZNRF1Q8ND25 227 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 TMEM185AQ8NFB2 350 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 H1FXQ92522 213 aaKnown RBP14.93□□□□□ -0.02
CPSF4-205ENST00000440514 EMG1Q92979 244 aaKnown RBP14.93□□□□□ -0.02
CPSF4-205ENST00000440514 SDSLQ96GA7 329 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 MED30Q96HR3 178 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 OR14A2Q96R54 314 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 NKX3-1Q99801 234 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-205ENST00000440514 CCDC90BQ9GZT6 254 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 RBFOX1Q9NWB1 397 aaKnown RBP14.93□□□□□ -0.02
CPSF4-205ENST00000440514 SLC25A10Q9UBX3 287 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-205ENST00000440514 MAB21L2Q9Y586 359 aa14.93□□□□□ -0.02
CPSF4-205ENST00000440514 CUBNO60494 3623 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 MAGEB3O15480 346 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 PDZK1IP1Q13113 114 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 GPR50Q13585 617 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 SPHARQ15513 63 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 MED22Q15528 200 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 Q499Y3 187 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 ARMCX4Q5H9R4 360 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 PRSS48Q7RTY5 328 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 MKXQ8IYA7 352 aa14.92□□□□□ -0.02
CPSF4-205ENST00000440514 RPUSD1Q9UJJ7 312 aaKnown RBP14.92□□□□□ -0.02
CPSF4-205ENST00000440514 IGHV3OR16-10A0A075B7F0 116 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 KNG1P01042 644 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 IFNA2P01563 188 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 NDUFB7P17568 137 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 EPHA1P21709 976 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 EEF1B2P24534 225 aaKnown RBP14.91□□□□□ -0.02
CPSF4-205ENST00000440514 PRDX2P32119 198 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 MAP2K4P45985 399 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 CAPZA1P52907 286 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 SNU13P55769 128 aaKnown RBP14.91□□□□□ -0.02
CPSF4-205ENST00000440514 GABARAPL2P60520 117 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 ZP1P60852 638 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 KISS1Q15726 138 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 KLF17Q5JT82 389 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-205ENST00000440514 MS4A15Q8N5U1 240 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 NANPQ8TBE9 248 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 DCTN5Q9BTE1 182 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 CKLFQ9UBR5 152 aa14.91□□□□□ -0.02
CPSF4-205ENST00000440514 A0A1W2PPK0 400 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 MAGEA13PA6NCF6 341 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 GABRPO00591 440 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 ECDO95905 644 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-205ENST00000440514 SFTPBP07988 381 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 MAPK3P27361 379 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-205ENST00000440514 PPP3R1P63098 170 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 Q8IYB0 196 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 PNLDC1Q8NA58 520 aaKnown RBP14.9□□□□□ -0.02
CPSF4-205ENST00000440514 OR52N4Q8NGI2 321 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 UPRTQ96BW1 309 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 RHOFQ9HBH0 211 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 ISYNA1Q9NPH2 558 aa14.9□□□□□ -0.02
CPSF4-205ENST00000440514 TRAV8-7A0A075B6U6 113 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 TRBV5-7A0A0A0MS05 114 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 TRAV40A0A0B4J280 105 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 ZNF879B4DU55 563 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 GPR37O15354 613 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 RGS9O75916 674 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-205ENST00000440514 KDM4BO94953 1096 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 IGHV4-38-2P0DP08 117 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 PRKACAP17612 351 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 IGFBP3P17936 291 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-205ENST00000440514 FSTP19883 344 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 CAV3P56539 151 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 SRSF2Q01130 221 aaKnown RBP14.89□□□□□ -0.03
CPSF4-205ENST00000440514 COL10A1Q03692 680 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 INSL4Q14641 139 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 TRAM1Q15629 374 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 DDI2Q5TDH0 399 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 SATL1Q86VE3 508 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 FAM58AQ8N1B3 248 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 SVOPQ8N4V2 548 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 ZNF561Q8N587 486 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 LY6G5BQ8NDX9 201 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 C22orf15Q8WYQ4 148 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 DERL3Q96Q80 235 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 GPER1Q99527 375 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 PCGF1Q9BSM1 259 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 TMED9Q9BVK6 235 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 SIRPDQ9H106 197 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 ONECUT1Q9UBC0 465 aa14.89□□□□□ -0.03
CPSF4-205ENST00000440514 HSMCR30P0CW71 290 aa14.88□□□□□ -0.03
CPSF4-205ENST00000440514 PPIAL4GP0DN37 164 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms