RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 OR13C9Q8NGT0 318 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 TSEN15Q8WW01 171 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
LTBR-202ENST00000440421 EMG1Q92979 244 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 COMMD4Q9H0A8 199 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 ZMAT3Q9HA38 289 aaKnown RBP11.28□□□□□ -0.6
LTBR-202ENST00000440421 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
LTBR-202ENST00000440421 TRBV2A0A0J9YWF9 115 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 H0YAE9 185 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 CLDN34H7C241 214 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 M0R1W7 72 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 CASQ2O14958 399 aaPredicted RBP11.27□□□□□ -0.61
LTBR-202ENST00000440421 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 CYB5AP00167 134 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 TK1P04183 234 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 MELTFP08582 738 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 GNAO1P09471 354 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 BCL3P20749 454 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 DCKP27707 260 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 NPBWR2P48146 333 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 SNU13P55769 128 aaKnown RBP11.27□□□□□ -0.61
LTBR-202ENST00000440421 RPL31P62899 125 aaKnown RBP11.27□□□□□ -0.61
LTBR-202ENST00000440421 XAF1Q6GPH4 301 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 Q6YL49 198 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 RNF144BQ7Z419 303 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 MKXQ8IYA7 352 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 PNKDQ8N490 385 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 OR5D18Q8NGL1 313 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 SPSB1Q96BD6 273 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 PRDM13Q9H4Q3 707 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 METTL8Q9H825 291 aaKnown RBP11.27□□□□□ -0.61
LTBR-202ENST00000440421 NOX4Q9NPH5 578 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 RBFOX1Q9NWB1 397 aaKnown RBP11.27□□□□□ -0.61
LTBR-202ENST00000440421 DHDHQ9UQ10 334 aa11.27□□□□□ -0.61
LTBR-202ENST00000440421 IRGMA1A4Y4 181 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 CHRM2P08172 466 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 HKR1P10072 659 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 PIPP12273 146 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 MYL12AP19105 171 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 EEF1B2P24534 225 aaKnown RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 DUSP1P28562 367 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 CAPGP40121 348 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 SOX2P48431 317 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 IL18R1Q13478 541 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 AWAT1Q58HT5 328 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 METAP1DQ6UB28 335 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 TMPRSS11AQ6ZMR5 421 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 C8orf59Q8N0T1 100 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 ZCCHC4Q9H5U6 513 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 NEK6Q9HC98 313 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 NKX1-2Q9UD57 310 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 CLEC2DQ9UHP7 191 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 DIMT1Q9UNQ2 313 aaKnown RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
LTBR-202ENST00000440421 FAM96BQ9Y3D0 163 aa11.26□□□□□ -0.61
LTBR-202ENST00000440421 K7N7A8 449 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 NPFFO15130 113 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 HAND1O96004 215 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 HCKP08631 526 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 CCL3L1P16619 93 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 PRKACAP17612 351 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 CFPP27918 469 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 EDDM3BP56851 147 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 PDZK1IP1Q13113 114 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 ZNF273Q14593 569 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 C16orf87Q6PH81 154 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 FIP1L1Q6UN15 594 aaKnown RBP11.25□□□□□ -0.61
LTBR-202ENST00000440421 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 SERPINA12Q8IW75 414 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 Q8IYB0 196 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 RGP1Q92546 391 aaPredicted RBP11.25□□□□□ -0.61
LTBR-202ENST00000440421 GGHQ92820 318 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 TMEM80Q96HE8 168 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 CHIAQ9BZP6 476 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 FAM234AQ9H0X4 552 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 VCXQ9H320 206 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 DCLRE1BQ9H816 532 aa11.25□□□□□ -0.61
LTBR-202ENST00000440421 EXOSC1Q9Y3B2 195 aaKnown RBP11.25□□□□□ -0.61
LTBR-202ENST00000440421 IGKV1-12A0A0C4DH73 117 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 A0A1W2PPH5 198 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 TMEM82A0PJX8 343 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 MEIOCA2RUB1 952 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 ERICH4A6NGS2 130 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 SULT1B1O43704 296 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 ZNF737O75373 536 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 IGKV1D-12P01611 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms