RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HHLA2Q9UM44 414 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 HDGFL3Q9Y3E1 203 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 WIF1Q9Y5W5 379 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 SRCAPQ6ZRS2 3230 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 MYO10Q9HD67 2058 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 MEIKINA0A087WXM9 373 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A0A6YYH2 397 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 NSG1A0A0A6YYJ2 146 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 IGKV1D-43A0A0B4J1Z2 117 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 LOC102725191A0A1B0GVB3 256 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 METTL21EPA6NDL7 271 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 C5orf51A6NDU8 294 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GGT3PA6NGU5 568 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 A6NJ64 397 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SNRPGP15A8MWD9 76 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 D6RAR5 112 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 C16orf97H3BN30 126 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SMLR1H3BR10 107 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 H7C417 338 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SULT1C2O00338 296 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 P2RY10O00398 339 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ARPC1BO15143 372 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 FABP7O15540 132 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 AKR7A2O43488 359 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GMDSO60547 372 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 RAD1O60671 282 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 EIF1BO60739 113 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF780AO75290 641 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CTAG2O75638 210 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CBR3O75828 277 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 KDM4BO94953 1096 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 NDUFB6O95139 128 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 VAMP5O95183 116 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TGM6O95932 706 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PDGFBP01127 241 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OPN1LWP04000 364 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 UBCP0CG48 685 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 AKAIN1P0CW23 69 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PGA4P0DJD7 388 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PGA3P0DJD8 388 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SULT1A3P0DMM9 295 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SULT1A4P0DMN0 295 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SPP1P10451 314 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 COX6A1P12074 109 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PTHLHP12272 177 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CCL4P13236 92 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ICAM2P13598 275 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GABRA1P14867 456 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF43P17038 809 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 HSD11B1P28845 292 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SSR4P51571 173 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 P2RY4P51582 365 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 LUMP51884 338 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 EFNB2P52799 333 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 DSCR4P56555 118 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 MLF1P58340 268 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 RPS15P62841 145 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 DLK1P80370 383 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PMP22Q01453 160 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZFP36L1Q07352 338 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SIGLEC14Q08ET2 396 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 RIPPLY1Q0D2K3 151 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PLA2G7Q13093 441 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 RBM39Q14498 530 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TAF13Q15543 124 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF239Q16600 458 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 Q5BKY6 102 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM255AQ5JRV8 349 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 C1orf100Q5SVJ3 147 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PRAMEF20Q5VT98 475 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 CARD17Q5XLA6 110 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 LAMTOR1Q6IAA8 161 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC25A25Q6KCM7 469 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 C3orf33Q6P1S2 294 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC25A47Q6Q0C1 308 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMPPEQ6ZT21 453 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF767PQ75MW2 155 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GTPBP8Q8N3Z3 284 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SPICQ8N5J4 248 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 JAGN1Q8N5M9 183 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF611Q8N823 705 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 NOXO1Q8NFA2 376 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR1M1Q8NGA1 313 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR11G2Q8NGC1 345 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR11H7Q8NGC8 314 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR5M1Q8NGP8 315 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR1J4Q8NGS1 313 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2Y1Q8NGV0 311 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR6X1Q8NH79 312 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 LILRB4Q8NHJ6 448 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 THAP6Q8TBB0 222 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GPX8Q8TED1 209 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF431Q8TF32 576 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 GIMAP1Q8WWP7 306 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 PTX4Q96A99 478 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 BSCL2Q96G97 398 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 SFXN2Q96NB2 322 aa2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 UTP23Q9BRU9 249 aaKnown RBP2.94□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF436Q9C0F3 470 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms