RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 LHFPL6Q9Y693 200 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 TLCD2A6NGC4 264 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 IGHV2-70P01814 119 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 PNLIPP16233 465 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 CDX1P47902 265 aaPredicted RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 VEGFBP49765 207 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 ADIRFQ15847 76 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 RAET1LQ5VY80 246 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 OR2C3Q8N628 320 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 DMBX1Q8NFW5 382 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 PIGCQ92535 297 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 ZNF286AQ9HBT8 521 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 WFDC1Q9HC57 220 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 TREM2Q9NZC2 230 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 CCDC187A0A096LP49 1063 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 CTSDP07339 412 aaPredicted RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 GPX4P36969 197 aaPredicted RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 APOBEC1P41238 236 aaKnown RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 EWSR1Q01844 656 aaKnown RBP eCLIP7.94□□□□□ -1.141e-10■■■■□ 21.5
COPB1-202ENST00000439561 UBE2V2Q15819 145 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 THNSL2Q86YJ6 484 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 WDFY1Q8IWB7 410 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 C1orf87Q8N0U7 546 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 NOXO1Q8NFA2 376 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 OR10S1Q8NGN2 331 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 OR1N1Q8NGS0 311 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 TVP23CQ96ET8 276 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 FAM210BQ96KR6 192 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 MOB1AQ9H8S9 216 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 SLC2A9Q9NRM0 540 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 OBP2AQ9NY56 170 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 SLCO1B1Q9Y6L6 691 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 MYO7BQ6PIF6 2116 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 C5orf63A6NC05 138 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 CEBPZOSA8MTT3 80 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 SEC14L6B5MCN3 397 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 HSD17B6O14756 317 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 GABRG2P18507 467 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 RNF4P78317 190 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 IGLV3-21P80748 117 aaPredicted RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 SPEM2Q0P670 501 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 ZNF880Q6PDB4 577 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 FBXL14Q8N1E6 418 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 PRR18Q8N4B5 295 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 SNIP1Q8TAD8 396 aaKnown RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 SLC39A7Q92504 469 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 MRPL38Q96DV4 380 aaKnown RBP7.94□□□□□ -1.14
COPB1-202ENST00000439561 CABLES2Q9BTV7 478 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 ALKBH4Q9NXW9 302 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 ZDHHC8Q9ULC8 765 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 CLDN16Q9Y5I7 305 aa7.94□□□□□ -1.14
COPB1-202ENST00000439561 NKX2-6A6NCS4 301 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 M0R135 149 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 HMGB3O15347 200 aaKnown RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 TSPAN2O60636 221 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 CNOT4O95628 575 aaKnown RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 MMP9P14780 707 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 RND3P61587 244 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 QRFPP83859 136 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 MALLQ13021 153 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 TESK1Q15569 626 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 MPV17LQ2QL34 196 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 CYB5R2Q6BCY4 276 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 Q8WTZ3 238 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ZNF799Q96GE5 643 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 PACRGQ96M98 296 aaPredicted RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 SLC25A31Q9H0C2 315 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 LANCL2Q9NS86 450 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 STARD10Q9Y365 291 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 IGKV1-9A0A0C4DH69 117 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 PMS2P1A4D2B8 440 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 CXCL1P09341 107 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 PATE4P0C8F1 98 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 MPZP25189 248 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 TLE4Q04727 773 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 LRP11Q86VZ4 500 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 GPR137CQ8N3F9 429 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 CCDC54Q8NEL0 328 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 SPTSSAQ969W0 71 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ULBP2Q9BZM5 246 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 FGF21Q9NSA1 209 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 EML5Q05BV3 1969 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 A0A1W2PR80 420 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 CRYM-AS1A6NIL9 109 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 OR5H1A6NKK0 313 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 RBMXL2O75526 392 aaKnown RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 CLPSP04118 112 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 HOXA5P20719 270 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ECI1P42126 302 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 RBP2P50120 134 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 ZNF133P52736 654 aaPredicted RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 GRB2P62993 217 aaKnown RBP7.93□□□□□ -1.14
COPB1-202ENST00000439561 PIGYQ3MUY2 71 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 Q3ZCU0 254 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 NKAIN1Q4KMZ8 207 aa7.93□□□□□ -1.14
COPB1-202ENST00000439561 DPPA2Q7Z7J5 298 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms