RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ANKRD36BQ8N2N9 1353 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 MAST2Q6P0Q8 1798 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TRIOO75962 3097 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 HELZ2Q9BYK8 2649 aaKnown RBP1.91□□□□□ -2.1
VPS41-207ENST00000439468 NBEAQ8NFP9 2946 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 GBF1Q92538 1859 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 IGLV3-12A0A075B6K2 115 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 A0A0B4J2E0 115 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 CCL15-CCL14A0A0B4J2E2 113 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 HACD1B0YJ81 288 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 MANBAO00462 879 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 TRDMT1O14717 391 aaKnown RBP1.91□□□□□ -2.1
VPS41-207ENST00000439468 PAHP00439 452 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 MBP02144 154 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 IL4P05112 153 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 CD28P10747 220 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 PRKACBP22694 351 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 HTR1DP28221 377 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 TGFBR1P36897 503 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 PRLHRP49683 370 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 OR2B8PP59922 312 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 PPIDQ08752 370 aaKnown RBP1.91□□□□□ -2.1
VPS41-207ENST00000439468 CCL15Q16663 113 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 YIF1BQ5BJH7 314 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 TPRG1LQ5T0D9 272 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 AP1ARQ63HQ0 302 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 H3F3CQ6NXT2 135 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 GUSBP11Q6P575 273 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 CD300LGQ6UXG3 332 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 NEGR1Q7Z3B1 354 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 TMEM105Q8N8V8 129 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 FAM184AQ8NB25 1140 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 OR5T3Q8NGG3 340 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 DCAKDQ8WVC6 231 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 DEDD2Q8WXF8 326 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 RCN3Q96D15 328 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 RNF157Q96PX1 679 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 KCNS3Q9BQ31 491 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 MARVELD1Q9BSK0 173 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 C1orf198Q9H425 327 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 DHX35Q9H5Z1 703 aaKnown RBP1.91□□□□□ -2.1
VPS41-207ENST00000439468 RHBDL2Q9NX52 303 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 CES1P1Q9UKY3 287 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 CBY1Q9Y3M2 126 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 HES2Q9Y543 173 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 DDX60LQ5H9U9 1706 aaKnown RBP1.91□□□□□ -2.1
VPS41-207ENST00000439468 DOPEY1Q5JWR5 2465 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 TTC21AQ8NDW8 1320 aa1.91□□□□□ -2.1
VPS41-207ENST00000439468 SCN7AQ01118 1682 aa1.9□□□□□ -2.1
VPS41-207ENST00000439468 CHD9Q3L8U1 2897 aa1.9□□□□□ -2.1
VPS41-207ENST00000439468 SCN1AP35498 2009 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 TICRRQ7Z2Z1 1910 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 LINC01619G3V211 115 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 PLIN3O60664 434 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 CYB5R3P00387 301 aaPredicted RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 CD5P06127 495 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 IL1RNP18510 177 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 CELP19835 753 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 CLDN6P56747 220 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 YWHAEP62258 255 aaKnown RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 ELF3P78545 371 aaPredicted RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 PRSS8Q16651 343 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 ULK3Q6PHR2 472 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 UNQ9165/PRO28630Q6UXU0 137 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 ASCL4Q6XD76 172 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 Q6ZSR6 202 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 BHLHA15Q7RTS1 189 aaPredicted RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 SLC30A8Q8IWU4 369 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 STK40Q8N2I9 435 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 LRRC52Q8N7C0 313 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 OR51L1Q8NGJ5 315 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 OR4A15Q8NGL6 344 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 OR8D1Q8WZ84 308 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 WDR34Q96EX3 536 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 FAM19A4Q96LR4 140 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 ULBP2Q9BZM5 246 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 MARCOQ9UEW3 520 aaPredicted RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 SIGLEC7Q9Y286 467 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 LRRC42Q9Y546 428 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 OR51B2Q9Y5P1 312 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 S4R3C0 116 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 C2orf16Q68DN1 1984 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 NFAT5O94916 1531 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 CPSF1Q10570 1443 aaKnown RBP1.9□□□□□ -2.11
VPS41-207ENST00000439468 PTPN13Q12923 2485 aa1.9□□□□□ -2.11
VPS41-207ENST00000439468 CENPVL3A0A0U1RRI6 287 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 A0A1W2PPV4 95 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 BTNL10A8MVZ5 291 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 H0YC42 278 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 TAAR5O14804 337 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 CDRT1O95170 752 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 LCA5LO95447 670 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 RPN2P04844 631 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 KLK1P06870 262 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 MSR1P21757 451 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms