RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 FOXJ2Q9P0K8 574 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 TMEM30CPA0ZSE6 113 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 ADAM11O75078 769 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 JTBO76095 146 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 RAG2P55895 527 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 SOHLH1Q5JUK2 328 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 FAM27BQ5VT28 67 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 TMEM182Q6ZP80 229 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-205ENST00000439160 SHISA5Q8N114 240 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 ZDHHC22Q8N966 263 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF355PQ9NSJ1 428 aa10.8□□□□□ -0.68
TCOF1-205ENST00000439160 TRIM64BA6NI03 449 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 DEFB108AA8MXU0 73 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 NPIPB9F8W1W9 429 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 CDIPTO14735 213 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 KRASP01116 189 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 PGA4P0DJD7 388 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 PGA3P0DJD8 388 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 GABRA1P14867 456 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 EIF2S3P41091 472 aaKnown RBP10.79□□□□□ -0.68
TCOF1-205ENST00000439160 RPS4XP62701 263 aaKnown RBP10.79□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF816Q0VGE8 651 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-205ENST00000439160 MICBQ29980 383 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 BAP18Q8IXM2 172 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 MARC2Q969Z3 335 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 DHRS9Q9BPW9 319 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 MESP1Q9BRJ9 268 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 BIN3Q9NQY0 253 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 OR5B21A6NL26 309 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 E5RGE8 158 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 TNFRSF1AP19438 455 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 LYPD8Q6UX82 237 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 PPP1R32Q7Z5V6 425 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 LRRC29Q8WV35 223 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 PPP1R3EQ9H7J1 279 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 DLL4Q9NR61 685 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 CYB5R1Q9UHQ9 305 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 ZMIZ1Q9ULJ6 1067 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 MPC1Q9Y5U8 109 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 NME2P1O60361 137 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 LINC01590Q5TEZ4 76 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 TMEM108Q6UXF1 575 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 PECRQ9BY49 303 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 GLRX2Q9NS18 164 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 SERTAD4Q9NUC0 356 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 TAAR3PQ9P1P4 343 aa10.79□□□□□ -0.68
TCOF1-205ENST00000439160 ZFP92A6NM28 416 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 TXNL1O43396 289 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 IGHV3-13P01766 116 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 IGHV3-7P01780 117 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 HBE1P02100 147 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF92Q03936 586 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 NUFIP2Q7Z417 695 aaKnown RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 FRZBQ92765 325 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 FN3KRPQ9HA64 309 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CST7O76096 145 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CNIH1O95406 144 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 OR8U8P0C7N1 319 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 KLF3P57682 345 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 PSG4Q00888 419 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF626Q68DY1 528 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CCL17Q92583 94 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 PCDHGA9Q9Y5G4 932 aaKnown RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 KLF4O43474 513 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 HPXP02790 462 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CXCL3P19876 107 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CEACAM6P40199 344 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 ZFP62Q8NB50 900 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 CHST5Q9GZS9 411 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 KIF26BQ2KJY2 2108 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 A0A1W2PP11 408 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 UBE2KP61086 200 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 ZNF239Q16600 458 aaKnown RBP10.78□□□□□ -0.68
TCOF1-205ENST00000439160 AANATQ16613 207 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 OR14K1Q8NGZ2 314 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 ST8SIA2Q92186 375 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 FGF11Q92914 225 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 NARFLQ9H6Q4 476 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 PRR13Q9NZ81 148 aa10.78□□□□□ -0.68
TCOF1-205ENST00000439160 TRGV10A0A0A0MS01 117 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 C9orf170A2RU37 121 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 CTDSPLO15194 276 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.68
TCOF1-205ENST00000439160 LMX1BO60663 402 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 ROM1Q03395 351 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 C11orf87Q6NUJ2 197 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 CA5BP1Q8WTZ4 195 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 SHARPINQ9H0F6 387 aa10.77□□□□□ -0.68
TCOF1-205ENST00000439160 SF3B6Q9Y3B4 125 aaKnown RBP10.77□□□□□ -0.68
TCOF1-205ENST00000439160 ARPC4-TTLL3A0A0A6YYG9 625 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 ADAP1O75689 374 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 CFHR1Q03591 330 aa10.77□□□□□ -0.69
TCOF1-205ENST00000439160 PIGYQ3MUY2 71 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms