RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TFR2Q9UP52 801 aa2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 NEU3Q9UQ49 428 aa2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 TMEM56-RWDD3S4R434 201 aa2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 SOGA1O94964 1423 aa2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 PDS5BQ9NTI5 1447 aa2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 THOC2Q8NI27 1593 aaKnown RBP2.47□□□□□ -2.01
LSM1P1-201ENST00000438629 SYNMO15061 1565 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 WRNQ14191 1432 aaPredicted RBP eCLIP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 C9orf84Q5VXU9 1444 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 TRBV6-6A0A0A6YYG2 114 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 A0A1W2PRG6 482 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FAM92AA1XBS5 289 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 C9orf170A2RU37 121 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 A6NDN8 102 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 A6NDX4 124 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 C21orf140B9A014 251 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FTCDNL1E5RQL4 147 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 KRTAP4-16G5E9R7 235 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 K7EN84 100 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 M0QYV0 167 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 PLPP3O14495 311 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CDIPTO14735 213 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 AZIN1O14977 448 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SLC31A1O15431 190 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CRXO43186 299 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 DLEU1O43261 78 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CDC40O60508 579 aaKnown RBP eCLIP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RAD1O60671 282 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ALOX12BO75342 701 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 TRAPPC6AO75865 159 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CYB5R3P00387 301 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 HPRT1P00492 218 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 IFNA4P05014 189 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR8U9P0C7N5 309 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ERP29P30040 261 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 GNRHRP30968 328 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 NBL1P41271 181 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 VDAC2P45880 294 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RPL5P46777 297 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 EIF2B2P49770 351 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CCR6P51684 374 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SNAP25P60880 206 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 BAMBIQ13145 260 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SPA17Q15506 151 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 GABRA6Q16445 453 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 MAPK14Q16539 360 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ZBED5Q49AG3 693 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RBM48Q5RL73 367 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OGFRL1Q5TC84 451 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 TMEM42Q69YG0 159 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 DRAM2Q6UX65 266 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FAM131AQ6UXB0 335 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 TIFABQ6ZNK6 161 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 C6orf120Q7Z4R8 191 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 MRPL52Q86TS9 123 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RIMKLAQ8IXN7 391 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ARIH2OSQ8N7S6 290 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 Q8N9W7 124 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR2A1Q8NGT9 310 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR13D1Q8NGV5 346 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR10K1Q8NGX5 313 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR9G1Q8NH87 305 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SDR42E1Q8WUS8 393 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SRSF12Q8WXF0 261 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 BAALCQ8WXS3 180 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR8D1Q8WZ84 308 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RDH5Q92781 318 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RPEQ96AT9 228 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RPUSD4Q96CM3 377 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FLYWCH2Q96CP2 140 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 YIPF6Q96EC8 236 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 L3HYPDHQ96EM0 354 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 SFRP2Q96HF1 295 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FCRL1Q96LA6 429 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 Q96MT0 163 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 OR2M2Q96R28 347 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RARRES2Q99969 163 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 RIOK2Q9BVS4 552 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 NEUROG2Q9H2A3 272 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 DSN1Q9H410 356 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 UBE2ZQ9H832 354 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ZNF331Q9NQX6 463 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 ZNF391Q9UJN7 358 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 DKKL1Q9UK85 242 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 FARSAQ9Y285 508 aaKnown RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 KIF15Q9NS87 1388 aa2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 COL22A1Q8NFW1 1626 aaPredicted RBP2.46□□□□□ -2.02
LSM1P1-201ENST00000438629 A2MP01023 1474 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 ABCB11O95342 1321 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 SMG6Q86US8 1419 aaKnown RBP2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 A0A0A6YYD5 115 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 ZNF816-ZNF321PA0A0X1KG74 233 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 FAM166BA8MTA8 275 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 SMKR1H3BMG3 65 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 KPNA4O00629 521 aaPredicted RBP2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 BHLHE40O14503 412 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 RAD51CO43502 376 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 HPGDSO60760 199 aa2.45□□□□□ -2.02
LSM1P1-201ENST00000438629 CCDC22O60826 627 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms