RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 LOC102723971A0A1B0GUV8 181 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 TMPRSS2O15393 492 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 PSG6Q00889 435 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 ZNF425Q6IV72 752 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 RNASEK-C17orf49H0YIS7 233 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 SLC25A5P05141 298 aaKnown RBP15.22■□□□□ 0.03
PTPRF-209ENST00000438120 BCL2L2Q92843 193 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-209ENST00000438120 MTFP1Q9UDX5 166 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 NAGKQ9UJ70 344 aa15.22■□□□□ 0.03
PTPRF-209ENST00000438120 C9orf170A2RU37 121 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 TGIF2LXQ8IUE1 241 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 OR2Y1Q8NGV0 311 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 PDCD6O75340 191 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 IGHA1P01876 353 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 IGHA2P01877 340 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 FABP4P15090 132 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 TSPO2Q5TGU0 170 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 ZAR1Q86SH2 424 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 ZDHHC22Q8N966 263 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 LURAP1Q96LR2 239 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 VSTM2LQ96N03 204 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 TMEM147Q9BVK8 224 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-209ENST00000438120 GYPAP02724 150 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 GGNBP1Q5YKI7 109 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 LYPD8Q6UX82 237 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 BHLHA15Q7RTS1 189 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-209ENST00000438120 SLC25A22Q9H936 323 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 PAX5Q02548 391 aa15.21■□□□□ 0.03
PTPRF-209ENST00000438120 FBP1P09467 338 aa15.21■□□□□ 0.02
PTPRF-209ENST00000438120 PJVKQ0ZLH3 352 aa15.21■□□□□ 0.02
PTPRF-209ENST00000438120 CCL3P10147 92 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 PMCHP20382 165 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 SRP14P37108 136 aaKnown RBP15.2■□□□□ 0.02
PTPRF-209ENST00000438120 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
PTPRF-209ENST00000438120 FNDC7Q5VTL7 733 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 TO15178 435 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 GUK1Q16774 197 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 TCTE3Q8IZS6 198 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 RAB18Q9NP72 206 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 SLC17A5Q9NRA2 495 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 TMED3Q9Y3Q3 217 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 JMJD6Q6NYC1 403 aaPredicted RBP15.2■□□□□ 0.02
PTPRF-209ENST00000438120 MOB1BQ7L9L4 216 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 ABHD14AQ9BUJ0 271 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 CXXC4Q9H2H0 198 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 ABHD3Q8WU67 409 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 GAL3ST2Q9H3Q3 398 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 PTTG1IPP53801 180 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 RAC3P60763 192 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 TIAL1Q01085 375 aaKnown RBP eCLIP15.2■□□□□ 0.024e-6■■■□□ 17.4
PTPRF-209ENST00000438120 PECRQ9BY49 303 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 NXF2Q9GZY0 626 aaKnown RBP15.2■□□□□ 0.02
PTPRF-209ENST00000438120 WDR13Q9H1Z4 485 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
PTPRF-209ENST00000438120 IGHV5-10-1A0A0J9YXX1 117 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 OR6X1Q8NH79 312 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 UCN2Q96RP3 112 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 HMGA2P52926 109 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 SUMO1P63165 101 aaKnown RBP15.19■□□□□ 0.02
PTPRF-209ENST00000438120 RTP5Q14D33 572 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 COMMD1Q8N668 190 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 OR4F17Q8NGA8 305 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 GPR137Q96N19 417 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 NAA60Q9H7X0 242 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 hADV38S2A0JD32 116 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 ORM2P19652 201 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 FOXO1Q12778 655 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 IGFBP7Q16270 282 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 TNXAQ16473 311 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 DEGS2Q6QHC5 323 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 CACFD1Q9UGQ2 172 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 NHSL1Q5SYE7 1610 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 CXorf58Q96LI9 332 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 BCL3P20749 454 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 ETV3LQ6ZN32 361 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 TMPRSS5Q9H3S3 457 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 UCK1Q9HA47 277 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 UBTD1Q9HAC8 227 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 TINAGQ9UJW2 476 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
PTPRF-209ENST00000438120 DOCK1Q14185 1865 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 LIPT2A6NK58 231 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 CHRDL1Q9BU40 450 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 F5H697 171 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 CDIPTO14735 213 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 CD3EP07766 207 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 FGF2P09038 288 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 MDH2P40926 338 aaKnown RBP15.18■□□□□ 0.02
PTPRF-209ENST00000438120 SKP2Q13309 424 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 HIKESHIQ53FT3 197 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 ZBTB37Q5TC79 503 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 POMT1Q9Y6A1 747 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 FFAR1O14842 300 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 CST4P01036 141 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 GP1BAP07359 652 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 NQO2P16083 231 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 MOGAT3Q86VF5 341 aa15.18■□□□□ 0.02
PTPRF-209ENST00000438120 NUBPLQ8TB37 319 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms