RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 BPNT1O95861 308 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 UBBP0CG47 229 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 TMEM225BP0DP42 221 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 CALCBP10092 127 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 SNRPBP14678 240 aaKnown RBP10.21□□□□□ -0.77
PTPRF-208ENST00000437607 HAAOP46952 286 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 CLDN12P56749 244 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 SCAND1P57086 179 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 C1orf100Q5SVJ3 147 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 Q6ZR03 302 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 C1orf229Q6ZS94 237 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-208ENST00000437607 GLCCI1Q86VQ1 547 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 OR4D6Q8NGJ1 314 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 ZFAND2BQ8WV99 257 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 TMEM186Q96B77 213 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 CEP19Q96LK0 163 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 MMP27Q9H306 513 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 ELL3Q9HB65 397 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-208ENST00000437607 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 HIF1ANQ9NWT6 349 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 COMMD3Q9UBI1 195 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 ZDHHC8Q9ULC8 765 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 POLDIP2Q9Y2S7 368 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 PEX16Q9Y5Y5 336 aa10.21□□□□□ -0.77
PTPRF-208ENST00000437607 DOCK11Q5JSL3 2073 aa10.21□□□□□ -0.78
PTPRF-208ENST00000437607 IGKV1-27A0A075B6S5 117 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 A0A0A6YYJ9 748 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 A0A1B0GWJ7 208 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 H0YL77 283 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 TPD52L2O43399 206 aaKnown RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 RP2O75695 350 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 AVPP01185 164 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 ARSBP15848 533 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 EGR1P18146 543 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 CD200P41217 278 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 PTGFRP43088 359 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 GPR6P46095 362 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 SRP9P49458 86 aaKnown RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 COMPP49747 757 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 ZP1P60852 638 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 LMO4P61968 165 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 TNFAIP6P98066 277 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 HAGHLQ6PII5 290 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 GLIPR1L1Q6UWM5 242 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 OR51D1Q8NGF3 324 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 TBC1D15Q8TC07 691 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 RDH5Q92781 318 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 FAM3DQ96BQ1 224 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 PKIBQ9C010 78 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 FGF23Q9GZV9 251 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 NXF2Q9GZY0 626 aaKnown RBP10.2□□□□□ -0.78
PTPRF-208ENST00000437607 CST11Q9H112 138 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 METTL9Q9H1A3 318 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 GHRLQ9UBU3 117 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 SPATA2Q9UM82 520 aa10.2□□□□□ -0.78
PTPRF-208ENST00000437607 hCG_1807616A0A1W2PRN6 198 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 C17orf100A8MU93 164 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 FAM25AB3EWG3 89 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 FAM25CB3EWG5 89 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 FAM25GB3EWG6 89 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 SPRY1O43609 319 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-208ENST00000437607 KDM4BO94953 1096 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 PAHP00439 452 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 IGHV1-46P01743 117 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 GRPP07492 148 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 MSMBP08118 114 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 NAT2P11245 290 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 ZNF154Q13106 437 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 RSU1Q15404 277 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 PCGF3Q3KNV8 242 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 UBE2NLQ5JXB2 153 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 PRAMEF6Q5VXH4 476 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 SLC25A26Q70HW3 274 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 OR2W3Q7Z3T1 314 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 ANGPTL5Q86XS5 388 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 LYPD6Q86Y78 171 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 LAX1Q8IWV1 398 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 MKXQ8IYA7 352 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 CELF2-AS1Q8N7Q2 184 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 SAMD12Q8N8I0 201 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 ZSCAN4Q8NAM6 433 aaPredicted RBP10.19□□□□□ -0.78
PTPRF-208ENST00000437607 MEGF10Q96KG7 1140 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 OR2V2Q96R30 315 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 EGLN1Q9GZT9 426 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 KCNK15Q9H427 330 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 PCDHB16Q9NRJ7 776 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 TREM2Q9NZC2 230 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 OR5V1Q9UGF6 321 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 ING4Q9UNL4 249 aa10.19□□□□□ -0.78
PTPRF-208ENST00000437607 IGHV3-64DA0A0J9YX35 117 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TMEM89A2RUT3 159 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TRAPPC2LH3BP13 241 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 ANGPTL7O43827 346 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 ZNF780AO75290 641 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-208ENST00000437607 CRTAPO75718 401 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-208ENST00000437607 CSTBP04080 98 aaKnown RBP10.18□□□□□ -0.78
PTPRF-208ENST00000437607 ADH4P08319 380 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms