RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 INO80CQ6PI98 192 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-216ENST00000437340 Q6ZS92 163 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 RFPL4BQ6ZWI9 263 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 ADAD2Q8NCV1 583 aaKnown RBP22.09■■□□□ 1.13
CPNE1-216ENST00000437340 LILRB4Q8NHJ6 448 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 WDR89Q96FK6 387 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-216ENST00000437340 FGF23Q9GZV9 251 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-216ENST00000437340 HEXA-AS1Q9H8Q6 139 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 CRIM1Q9NZV1 1036 aa22.09■■□□□ 1.13
CPNE1-216ENST00000437340 ANKRD11Q6UB99 2663 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-216ENST00000437340 K7ENP7 123 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 TSC22D2O75157 780 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 DUS4LO95620 317 aaKnown RBP22.08■■□□□ 1.13
CPNE1-216ENST00000437340 PLA2G5P39877 138 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 GMFBP60983 142 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 AADACL3Q5VUY0 350 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 CNEP1R1Q8N9A8 125 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 C1orf162Q8NEQ5 155 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-216ENST00000437340 SULT4A1Q9BR01 284 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 RAXQ9Y2V3 346 aa22.08■■□□□ 1.13
CPNE1-216ENST00000437340 TPD52L2O43399 206 aaKnown RBP22.07■■□□□ 1.12
CPNE1-216ENST00000437340 AKR1C4P17516 323 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 COX5AP20674 150 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 S100A1P23297 94 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 NFYAP23511 347 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-216ENST00000437340 ECI1P42126 302 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 HAAOP46952 286 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 NPY4RP50391 375 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 GPM6AP51674 278 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 NHLRC3Q5JS37 347 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 MKXQ8IYA7 352 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 NAXEQ8NCW5 288 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 MAFIPQ8WZ33 124 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 C5orf66Q9H5L9 145 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 ANXA10Q9UJ72 324 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 ZNF732B4DXR9 585 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 PDGFAP04085 211 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 PPP3CBP16298 524 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 FUT3P21217 361 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 ARPC4P59998 168 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 TEX261Q6UWH6 196 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 FBXW12Q6X9E4 464 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 OR8H1Q8NGG4 311 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 OR5P3Q8WZ94 311 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 HDHD3Q9BSH5 251 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-216ENST00000437340 U3KQ87 197 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 IGF2RP11717 2491 aa22.07■■□□□ 1.12
CPNE1-216ENST00000437340 OR5B21A6NL26 309 aa22.06■■□□□ 1.12
CPNE1-216ENST00000437340 SDCBPO00560 298 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-216ENST00000437340 LYZL6O75951 148 aa22.06■■□□□ 1.12
CPNE1-216ENST00000437340 CD8AP01732 235 aa22.06■■□□□ 1.12
CPNE1-216ENST00000437340 SEC61A1P61619 476 aaKnown RBP22.06■■□□□ 1.12
CPNE1-216ENST00000437340 CLEC4MQ9H2X3 399 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-216ENST00000437340 ZNF581Q9P0T4 197 aa22.06■■□□□ 1.12
CPNE1-216ENST00000437340 CACNA1GO43497 2377 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 DOCK7Q96N67 2140 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 IGKV1D-8A0A087WSZ0 117 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 MCRIP1C9JLW8 97 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 FCGR3AP08637 254 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 SSTR2P30874 369 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 NPBWR2P48146 333 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 ELMOD3Q96FG2 381 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 CDH20Q9HBT6 801 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 PLSCR4Q9NRQ2 329 aa22.05■■□□□ 1.12
CPNE1-216ENST00000437340 ZNF629Q9UEG4 869 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-216ENST00000437340 K7EM74 188 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 MSTNO14793 375 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 VAMP1P23763 118 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 FGF12P61328 243 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 FGL1Q08830 312 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 LHX6Q9UPM6 363 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 RFPL4AA6NLU0 287 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 RFPL4AL1F8VTS6 287 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 L7N2F9 121 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 TMEM211Q6ICI0 200 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 ZNF573Q86YE8 665 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 SLAMF9Q96A28 289 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 TMEM230Q96A57 120 aa22.04■■□□□ 1.12
CPNE1-216ENST00000437340 RTBDNQ9BSG5 229 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-216ENST00000437340 PTPRQQ9UMZ3 2332 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 A0A0B4J2A0 478 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 OR5H14A6NHG9 310 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 DBX1A6NMT0 343 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 M0R233 179 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 SMPD2O60906 423 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 CBR1P16152 277 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 CXCL2P19875 107 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 BCL3P20749 454 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 GNG3P63215 75 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 DAZAP2Q15038 168 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-216ENST00000437340 VWA1Q6PCB0 445 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 SHPKQ9UHJ6 478 aa22.03■■□□□ 1.12
CPNE1-216ENST00000437340 TRAPPC2LH3BP13 241 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 OR7C1O76099 320 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-216ENST00000437340 SFT2D2O95562 160 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 HOXC12P31275 282 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 HTR2BP41595 481 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 IDH3GP51553 393 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-216ENST00000437340 OPCMLQ14982 345 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 BHLHE23Q8NDY6 225 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms