RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZNF71Q9NQZ8 489 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-204ENST00000436978 TMEFF2Q9UIK5 374 aaPredicted RBP14.08□□□□□ -0.16
PTPN13-204ENST00000436978 S100A4P26447 101 aaKnown RBP14.08□□□□□ -0.16
PTPN13-204ENST00000436978 SKP2Q13309 424 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 C19orf35Q6ZS72 473 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 OR6S1Q8NH40 331 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 PCOLCE2Q9UKZ9 415 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 LIPT2A6NK58 231 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 SEMG1P04279 462 aa14.08□□□□□ -0.16
PTPN13-204ENST00000436978 RP1P56715 2156 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 LANCL1O43813 399 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ACSM4P0C7M7 580 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 HMGA2P52926 109 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 KIAA0141Q14154 515 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 LINC00303Q3SY05 128 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 OTPQ5XKR4 325 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 AMER3Q8N944 861 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 OR4S2Q8NH73 311 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 DNPH1O43598 174 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 MPGP29372 298 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 UBE3DQ7Z6J8 389 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 VSTM2AQ8TAG5 236 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 C10orf90Q96M02 699 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ICAM5Q9UMF0 924 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 PTPRFP10586 1907 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 PYCARD-AS1I3L0S3 204 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 K7ESF4 209 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 LGALS7P47929 136 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 LSMEM1Q8N8F7 131 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 SVILO95425 2214 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ADAM20O43506 726 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ZFPL1O95159 310 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 PNPP00491 289 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ZXDAP98168 799 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 ACSM6Q6P461 480 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 WDFY2Q96P53 400 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 PSG11Q9UQ72 335 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 A0A1W2PR80 420 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 TMEM210A6NLX4 147 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 TRDCB7Z8K6 153 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 CT62P0C5K7 136 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 FAM27D1Q5T7N8 215 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 NAA60Q9H7X0 242 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 FCGR3BO75015 233 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 CRYBB2P43320 205 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 GMPPAQ96IJ6 420 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 NDUFB6O95139 128 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 CDKN2AP42771 156 aaKnown RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 KIR2DL1P43626 348 aaPredicted RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 LIMK1P53667 647 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 CCDC190Q86UF4 302 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 PCNPQ8WW12 178 aaKnown RBP14.07□□□□□ -0.16
PTPN13-204ENST00000436978 CES1P1Q9UKY3 287 aa14.07□□□□□ -0.16
PTPN13-204ENST00000436978 RFPL4AA6NLU0 287 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 B4E171 279 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 RFPL4AL1F8VTS6 287 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 SP1P08047 785 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 TSPAN7P41732 249 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 GUCA2AQ02747 115 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 ADAM5Q6NVV9 412 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 SLC24A4Q8NFF2 622 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 SLC45A2Q9UMX9 530 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 PJVKQ0ZLH3 352 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 COL13A1Q5TAT6 717 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-204ENST00000436978 ST8SIA2Q92186 375 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 SAP30LQ9HAJ7 183 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 ZNF230Q9UIE0 474 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-204ENST00000436978 CBR1P16152 277 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-204ENST00000436978 Q3ZCU0 254 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 Q7L0L9 218 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 FAAP24Q9BTP7 215 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 MAGEA5P43359 124 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 ATP6V1FQ16864 119 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 CCDC71Q8IV32 467 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-204ENST00000436978 OR52B4Q8NGK2 314 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 UBTD1Q9HAC8 227 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-204ENST00000436978 PRR27Q6MZM9 219 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 OR8B12Q8NGG6 310 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 FAM60AQ9NP50 221 aa14.06□□□□□ -0.16
PTPN13-204ENST00000436978 PRR7Q8TB68 274 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 RXFP4Q8TDU9 374 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 SCN8AQ9UQD0 1980 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 MGAMO43451 1857 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 RNF2Q99496 336 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 CABIN1Q9Y6J0 2220 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 TGFBR1P36897 503 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 RAG2P55895 527 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 RTP5Q14D33 572 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 TMPRSS2O15393 492 aa14.05□□□□□ -0.16
PTPN13-204ENST00000436978 HOXD4P09016 255 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 ATG4DQ86TL0 474 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 WDR89Q96FK6 387 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 TINAGL1Q9GZM7 467 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-204ENST00000436978 CNTD2Q9H8S5 307 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms