RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 A0A075B6Q4 140 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 RGS5O15539 181 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 NPIPB7O75200 414 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 IGHV2-70P01814 119 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SAA4P35542 130 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 MSX2P35548 267 aaPredicted RBP3.84□□□□□ -1.79
UBE4A-202ENST00000431736 MTNR1BP49286 362 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 EGR4Q05215 589 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 PCK2Q16822 640 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SLC25A42Q86VD7 318 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 NDUFA11Q86Y39 141 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 CALHM1Q8IU99 346 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 TMEM217Q8N7C4 229 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 FAM216BQ8N7L0 139 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SLC26A10Q8NG04 563 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF837Q96EG3 531 aaPredicted RBP3.84□□□□□ -1.79
UBE4A-202ENST00000431736 RCC1LQ96I51 464 aaKnown RBP3.84□□□□□ -1.79
UBE4A-202ENST00000431736 TMED9Q9BVK6 235 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 HINT2Q9BX68 163 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 PKIBQ9C010 78 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 NECAP2Q9NVZ3 263 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 RHBDD3Q9Y3P4 386 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 MED12Q93074 2177 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 IGKV1D-42A0A075B6H8 117 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 A0A0G2JLM5 398 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 ZNF729A6NN14 1252 aaPredicted RBP3.84□□□□□ -1.79
UBE4A-202ENST00000431736 FAM25AB3EWG3 89 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 FAM25CB3EWG5 89 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 FAM25GB3EWG6 89 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SELENOFO60613 162 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SNAPC5O75971 98 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 SCGNO76038 276 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 UBOX5O94941 541 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 NDUFA7O95182 113 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 UBBP0CG47 229 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 CDK2P24941 298 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 MVDP53602 400 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 F2RL1P55085 397 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 CATR1Q13166 79 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 FAM201AQ5SY85 155 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 C1orf122Q6ZSJ8 110 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 TRUB1Q8WWH5 349 aaKnown RBP3.84□□□□□ -1.79
UBE4A-202ENST00000431736 MDFIQ99750 246 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 THYN1Q9P016 225 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 UGT2A1Q9Y4X1 527 aa3.84□□□□□ -1.79
UBE4A-202ENST00000431736 ANKRD17O75179 2603 aaKnown RBP3.84□□□□□ -1.8
UBE4A-202ENST00000431736 SNX3O60493 162 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 SAP30O75446 220 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 NAT1P18440 290 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 BDKRB2P30411 391 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 GPR12P47775 334 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 GNG2P59768 71 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 TAGLNQ01995 201 aaKnown RBP3.84□□□□□ -1.8
UBE4A-202ENST00000431736 LAMTOR1Q6IAA8 161 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 TEX38Q6PEX7 206 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 RBPMS2Q6ZRY4 209 aaKnown RBP3.84□□□□□ -1.8
UBE4A-202ENST00000431736 S100A7AQ86SG5 101 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 HS3ST5Q8IZT8 346 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 BATF2Q8N1L9 274 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 OR8H1Q8NGG4 311 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 FGGYQ96C11 551 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 DGCR6LQ9BY27 220 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 RIMS4Q9H426 269 aaPredicted RBP3.84□□□□□ -1.8
UBE4A-202ENST00000431736 ZCCHC4Q9H5U6 513 aa3.84□□□□□ -1.8
UBE4A-202ENST00000431736 MYEF2Q9P2K5 600 aaKnown RBP3.84□□□□□ -1.8
UBE4A-202ENST00000431736 NME4O00746 187 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 RAMP3O60896 148 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 MYF6P23409 242 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 SEC61A1P61619 476 aaKnown RBP3.83□□□□□ -1.8
UBE4A-202ENST00000431736 PAFAH1B2P68402 229 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 RIPK1Q13546 671 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 ZIK1Q3SY52 487 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-202ENST00000431736 TP53I3Q53FA7 332 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 PHYHD1Q5SRE7 291 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 MAVSQ7Z434 540 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 GPR32P1Q8NGA4 272 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 OR8U1Q8NH10 309 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 OR4K15Q8NH41 348 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM163Q8TC26 289 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 UFD1Q92890 307 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 RFT1Q96AA3 541 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 C1QTNF5Q9BXJ0 243 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 OR2S2Q9NQN1 319 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 MAB21L2Q9Y586 359 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 LOC107986453A0A1B0GWG9 222 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 CRHBPP24387 322 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 CDKN2AP42771 156 aaKnown RBP3.83□□□□□ -1.8
UBE4A-202ENST00000431736 RPL11P62913 178 aaKnown RBP3.83□□□□□ -1.8
UBE4A-202ENST00000431736 ENDOGQ14249 297 aaKnown RBP3.83□□□□□ -1.8
UBE4A-202ENST00000431736 TRAM1Q15629 374 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 C1QL4Q86Z23 238 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 OR8H3Q8N146 312 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 OR5D18Q8NGL1 313 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 Q8TCH9 128 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 TFAP2CQ92754 450 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 SIGLEC11Q96RL6 698 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 SEMA6AQ9H2E6 1030 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 ZNF696Q9H7X3 374 aa3.83□□□□□ -1.8
UBE4A-202ENST00000431736 UBE2J1Q9Y385 318 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms