RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SERTAD4Q9NUC0 356 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 FAM230AA0A1W2PPH8 454 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 A6NDX4 124 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 ZAR1LA6NP61 321 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 ALDOBP05062 364 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 SSX2Q16385 188 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 MINOS1Q5TGZ0 78 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 BCDIN3DQ7Z5W3 292 aaKnown RBP12.02□□□□□ -0.49
MSH5-208ENST00000429846 Q8IYB0 196 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 BATF2Q8N1L9 274 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 YIPF7Q8N8F6 280 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 TRMT10AQ8TBZ6 339 aaKnown RBP12.02□□□□□ -0.49
MSH5-208ENST00000429846 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.49
MSH5-208ENST00000429846 SNX22Q96L94 193 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 OR4F4Q96R69 305 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 WARS2Q9UGM6 360 aaKnown RBP12.02□□□□□ -0.49
MSH5-208ENST00000429846 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
MSH5-208ENST00000429846 hADV38S2A0JD32 116 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 A6NIN4 97 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 H3BUI4 141 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 M0R129 80 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 SYT7O43581 403 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 PEX14O75381 377 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 SERPINA3P01011 423 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 OR2T7P0C7T2 308 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 AZGP1P25311 298 aaKnown RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 FUT6P51993 359 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 OR12D2P58182 307 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 PLA1AQ53H76 456 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 KDM4DQ6B0I6 523 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 CCBE1Q6UXH8 406 aaPredicted RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 CATSPERDQ86XM0 798 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 ENTHD1Q8IYW4 607 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 WIPF2Q8TF74 440 aaPredicted RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 BORCS8Q96FH0 119 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 CADM1Q9BY67 442 aaKnown RBP12.01□□□□□ -0.49
MSH5-208ENST00000429846 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 LINC00312Q9Y6C7 94 aa12.01□□□□□ -0.49
MSH5-208ENST00000429846 G3V2T6 193 aa12□□□□□ -0.49
MSH5-208ENST00000429846 F2RL2O00254 374 aa12□□□□□ -0.49
MSH5-208ENST00000429846 PIN1P1O15428 100 aa12□□□□□ -0.49
MSH5-208ENST00000429846 MITFO75030 526 aaPredicted RBP12□□□□□ -0.49
MSH5-208ENST00000429846 SULT1C4O75897 302 aa12□□□□□ -0.49
MSH5-208ENST00000429846 RPP14O95059 124 aaKnown RBP12□□□□□ -0.49
MSH5-208ENST00000429846 PEX2P28328 305 aa12□□□□□ -0.49
MSH5-208ENST00000429846 RAB13P51153 203 aa12□□□□□ -0.49
MSH5-208ENST00000429846 DYNC1I2Q13409 638 aaKnown RBP12□□□□□ -0.49
MSH5-208ENST00000429846 HABP2Q14520 560 aaPredicted RBP12□□□□□ -0.49
MSH5-208ENST00000429846 UBE2V2Q15819 145 aa12□□□□□ -0.49
MSH5-208ENST00000429846 ATP6AP1Q15904 470 aa12□□□□□ -0.49
MSH5-208ENST00000429846 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
MSH5-208ENST00000429846 ARSJQ5FYB0 599 aaPredicted RBP12□□□□□ -0.49
MSH5-208ENST00000429846 ZBTB49Q6ZSB9 765 aa12□□□□□ -0.49
MSH5-208ENST00000429846 SLC25A26Q70HW3 274 aa12□□□□□ -0.49
MSH5-208ENST00000429846 SSX6Q7RTT6 188 aa12□□□□□ -0.49
MSH5-208ENST00000429846 TCF23Q7RTU1 214 aa12□□□□□ -0.49
MSH5-208ENST00000429846 TMEM219Q86XT9 240 aa12□□□□□ -0.49
MSH5-208ENST00000429846 ZDHHC13Q8IUH4 622 aa12□□□□□ -0.49
MSH5-208ENST00000429846 PP6455Q8WZ26 134 aa12□□□□□ -0.49
MSH5-208ENST00000429846 SLAMF9Q96A28 289 aa12□□□□□ -0.49
MSH5-208ENST00000429846 SLC7A6OSQ96CW6 309 aaPredicted RBP12□□□□□ -0.49
MSH5-208ENST00000429846 IL4I1Q96RQ9 567 aa12□□□□□ -0.49
MSH5-208ENST00000429846 ADI1Q9BV57 179 aa12□□□□□ -0.49
MSH5-208ENST00000429846 WNT10AQ9GZT5 417 aa12□□□□□ -0.49
MSH5-208ENST00000429846 GABARAPL1Q9H0R8 117 aa12□□□□□ -0.49
MSH5-208ENST00000429846 SESN1Q9Y6P5 492 aa12□□□□□ -0.49
MSH5-208ENST00000429846 IGKV1-27A0A075B6S5 117 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 A0A1W2PQL4 384 aaPredicted RBP11.99□□□□□ -0.49
MSH5-208ENST00000429846 METTL15A6NJ78 407 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 HAND1O96004 215 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 UBCP0CG48 685 aaKnown RBP11.99□□□□□ -0.49
MSH5-208ENST00000429846 CD28P10747 220 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 EPHA2P29317 976 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 HTR1FP30939 366 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ACTA2P62736 377 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ACTG2P63267 376 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ACTC1P68032 377 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ACTA1P68133 377 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 IL18R1Q13478 541 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ODF4Q2M2E3 257 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 SPIN3Q5JUX0 258 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 Q6ZPA2 131 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 EGFL6Q8IUX8 553 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ZNF676Q8N7Q3 588 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 DNAAF1Q8NEP3 725 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
MSH5-208ENST00000429846 R3HDM4Q96D70 268 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 TBX5Q99593 518 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 ZNF281Q9Y2X9 895 aa11.99□□□□□ -0.49
MSH5-208ENST00000429846 TRBV2A0A0J9YWF9 115 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 TMEM82A0PJX8 343 aa11.98□□□□□ -0.49
MSH5-208ENST00000429846 F8VVB4 439 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms