RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ADI1Q9BV57 179 aa13.84□□□□□ -0.19
TRIM39-209ENST00000428728 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
TRIM39-209ENST00000428728 MTCH1Q9NZJ7 389 aa13.84□□□□□ -0.19
TRIM39-209ENST00000428728 KIAA2026Q5HYC2 2103 aa13.84□□□□□ -0.19
TRIM39-209ENST00000428728 LOC107986453A0A1B0GWG9 222 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF737O75373 536 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 GATBO75879 557 aaKnown RBP13.83□□□□□ -0.2
TRIM39-209ENST00000428728 FCGR1AP12314 374 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 KIR2DS4P43632 304 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 FAM189A2Q15884 450 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 TP53I3Q53FA7 332 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 SLC25A26Q70HW3 274 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 PRSS35Q8N3Z0 413 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.2
TRIM39-209ENST00000428728 BORCS8Q96FH0 119 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 CHST5Q9GZS9 411 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 IL36RNQ9UBH0 155 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 GNG8Q9UK08 70 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 OAZ3Q9UMX2 235 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 TGP01266 2768 aa13.83□□□□□ -0.2
TRIM39-209ENST00000428728 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 C17orf98A8MV24 154 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 CHRM2P08172 466 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF728P0DKX0 622 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 KIR3DL2P43630 455 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 POU3F4P49335 361 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 RAB13P51153 203 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 DYNC1I2Q13409 638 aaKnown RBP13.82□□□□□ -0.2
TRIM39-209ENST00000428728 HABP2Q14520 560 aaPredicted RBP13.82□□□□□ -0.2
TRIM39-209ENST00000428728 LIAT1Q6ZQX7 453 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 TCF23Q7RTU1 214 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 TMEM219Q86XT9 240 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 OR13D1Q8NGV5 346 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 PIFOQ8TCI5 191 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 EME1Q96AY2 570 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 FOXRED1Q96CU9 486 aaPredicted RBP13.82□□□□□ -0.2
TRIM39-209ENST00000428728 GABARAPL3Q9BY60 117 aa13.82□□□□□ -0.2
TRIM39-209ENST00000428728 TMEM82A0PJX8 343 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 MEGF11A6BM72 1044 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 FAM90A8PA6NJQ4 464 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 ODF3BA8MYP8 253 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 SULT1C4O75897 302 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 IGHA1P01876 353 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 UBCP0CG48 685 aaKnown RBP13.81□□□□□ -0.2
TRIM39-209ENST00000428728 IGHV1-8P0DP01 117 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 FUT6P51993 359 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 SNU13P55769 128 aaKnown RBP13.81□□□□□ -0.2
TRIM39-209ENST00000428728 CNN3Q15417 329 aaKnown RBP13.81□□□□□ -0.2
TRIM39-209ENST00000428728 SSX2Q16385 188 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 LDLRAD2Q5SZI1 272 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF626Q68DY1 528 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 C11orf88Q6PI97 169 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 EGFL6Q8IUX8 553 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 RDH10Q8IZV5 341 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 LYG1Q8N1E2 194 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 TPRX1Q8N7U7 411 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 OR8J1Q8NGP2 316 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 RPS4Y2Q8TD47 263 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF714Q96N38 554 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 CHST6Q9GZX3 395 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF702PQ9H963 129 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 ABCB10Q9NRK6 738 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 TCF19Q9Y242 345 aa13.81□□□□□ -0.2
TRIM39-209ENST00000428728 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
TRIM39-209ENST00000428728 HAND1O96004 215 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 SERPINA3P01011 423 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 RBP4P02753 201 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 CALCBP10092 127 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 GABRR1P24046 479 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 DUSP1P28562 367 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 RASSF2P50749 326 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF85Q03923 595 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 CFHR4Q92496 578 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 RFKQ969G6 155 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 ADAT3Q96EY9 351 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-209ENST00000428728 SNX22Q96L94 193 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 RBFOX1Q9NWB1 397 aaKnown RBP13.8□□□□□ -0.2
TRIM39-209ENST00000428728 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
TRIM39-209ENST00000428728 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 JUNBP17275 347 aaPredicted RBP13.79□□□□□ -0.2
TRIM39-209ENST00000428728 PRKACAP17612 351 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 BCL3P20749 454 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 NPBWR2P48146 333 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 RBP2P50120 134 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 CDC42P60953 191 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 ACTA2P62736 377 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 ACTG2P63267 376 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 ACTC1P68032 377 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 ACTA1P68133 377 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 GRK1Q15835 563 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
TRIM39-209ENST00000428728 ZNF676Q8N7Q3 588 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 CCDC54Q8NEL0 328 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 PP6455Q8WZ26 134 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 CENPNQ96H22 339 aaPredicted RBP13.79□□□□□ -0.2
TRIM39-209ENST00000428728 OSBPL10Q9BXB5 764 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 IMPAD1Q9NX62 359 aa13.79□□□□□ -0.2
TRIM39-209ENST00000428728 A0A0G2JK05 382 aa13.78□□□□□ -0.2
TRIM39-209ENST00000428728 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms