RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 METTL15A6NJ78 407 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 SYT7O43581 403 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 IGHA1P01876 353 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ARG1P05089 322 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 KRT8P05787 483 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 VSIG10L2P0DP72 767 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 HTR1FP30939 366 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 LGALS4P56470 323 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ACTR3P61158 418 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ISL1P61371 349 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ZNF85Q03923 595 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 BNIP1Q12981 228 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 BEAN1Q3B7T3 259 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 ZNF626Q68DY1 528 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 RNF144BQ7Z419 303 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 OR2T6Q8NHC8 308 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
SEC13-210ENST00000428626 CEP19Q96LK0 163 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
SEC13-210ENST00000428626 CHST5Q9GZS9 411 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 WARS2Q9UGM6 360 aaKnown RBP12.52□□□□□ -0.41
SEC13-210ENST00000428626 TCF19Q9Y242 345 aa12.52□□□□□ -0.41
SEC13-210ENST00000428626 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 PSPNO60542 156 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 PRB2P02812 416 aaPredicted RBP12.51□□□□□ -0.41
SEC13-210ENST00000428626 OPN1MWP04001 364 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 CHRM2P08172 466 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OR2T7P0C7T2 308 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OPN1MW2P0DN77 364 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OPN1MW3P0DN78 364 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 CALCBP10092 127 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 FASP25445 335 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 NPBWR2P48146 333 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 EDDM3BP56851 147 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 FAM189A2Q15884 450 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 SSX2Q16385 188 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 SAMD5Q5TGI4 173 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 Q8N2B8 174 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 OR11H6Q8NGC7 330 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 EME1Q96AY2 570 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
SEC13-210ENST00000428626 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 RAB18Q9NP72 206 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 SLC7A11Q9UPY5 501 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
SEC13-210ENST00000428626 LOC107986453A0A1B0GWG9 222 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 hCG_1809904A0A1W2PP81 198 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 A0A1W2PR64 198 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 A0A1W2PRV1 198 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 ADARB2-AS1A8MUL3 147 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 MMP23AO75900 390 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 CD28P10747 220 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 DUSP1P28562 367 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 EDDM3AQ14507 147 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 C11orf88Q6PI97 169 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 BAIAP2L2Q6UXY1 529 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 CDCA4Q9BXL8 241 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 GABARAPL3Q9BY60 117 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 CHST6Q9GZX3 395 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 PLEKHA1Q9HB21 404 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 RBFOX1Q9NWB1 397 aaKnown RBP12.5□□□□□ -0.41
SEC13-210ENST00000428626 OAZ3Q9UMX2 235 aa12.5□□□□□ -0.41
SEC13-210ENST00000428626 TBL2Q9Y4P3 447 aaKnown RBP12.5□□□□□ -0.41
SEC13-210ENST00000428626 SULT1C4O75897 302 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 HAND1O96004 215 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 RBP4P02753 201 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 BCL3P20749 454 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 FUT6P51993 359 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 ZNF91Q05481 1191 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 FBLN7Q53RD9 439 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 KPRPQ5T749 579 aaPredicted RBP12.49□□□□□ -0.41
SEC13-210ENST00000428626 GDPD3Q7L5L3 318 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 OR4S1Q8NGB4 309 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 OR13D1Q8NGV5 346 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 SNX22Q96L94 193 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 RIBC2Q9H4K1 309 aa12.49□□□□□ -0.41
SEC13-210ENST00000428626 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEC13-210ENST00000428626 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
SEC13-210ENST00000428626 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
SEC13-210ENST00000428626 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
SEC13-210ENST00000428626 SNU13P55769 128 aaKnown RBP12.48□□□□□ -0.41
SEC13-210ENST00000428626 NANOS3P60323 173 aaKnown RBP12.48□□□□□ -0.41
SEC13-210ENST00000428626 ACTA2P62736 377 aa12.48□□□□□ -0.41
SEC13-210ENST00000428626 BLCAPP62952 87 aa12.48□□□□□ -0.41
SEC13-210ENST00000428626 ACTG2P63267 376 aa12.48□□□□□ -0.41
SEC13-210ENST00000428626 ACTC1P68032 377 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms