RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SURF2Q15527 256 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 GCNT2Q8N0V5 402 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
APOBEC3D-202ENST00000427494 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 ZNF732B4DXR9 585 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 ECI1P42126 302 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 ATXN7L3Q14CW9 347 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 NSUN5P2Q63ZY6 315 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 RFPL4BQ6ZWI9 263 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 HIST1H2AAQ96QV6 131 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
APOBEC3D-202ENST00000427494 A0A0B4J2A0 478 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ZNF891A8MT65 544 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 WISP2O76076 250 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 OR7C1O76099 320 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 KNG1P01042 644 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 FUT3P21217 361 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 TFAP2EQ6VUC0 442 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 OR5L1Q8NGL2 311 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 MICU1Q9BPX6 476 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 GSX2Q9BZM3 304 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ZNF442Q9H7R0 627 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 SHPKQ9UHJ6 478 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 TNFSF18Q9UNG2 199 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 A0A0D9SG52 128 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ESCO2Q56NI9 601 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 NHLRC3Q5JS37 347 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ALKAL2Q6UX46 152 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 SAXO1Q8IYX7 474 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 OR5A2Q8NGI9 324 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 OR6K3Q8NGY3 331 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 THAP6Q8TBB0 222 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ZNF75AQ96N20 296 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 ZNF286AQ9HBT8 521 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 AUP1Q9Y679 476 aa12.03□□□□□ -0.48
APOBEC3D-202ENST00000427494 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.48
APOBEC3D-202ENST00000427494 A0A1W2PR80 420 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 TUBAL3A6NHL2 446 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 AQP7O14520 342 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 ADAP1O75689 374 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 RPS2P15880 293 aaKnown RBP12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 IGHV1-2P23083 117 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 NOVA1P51513 510 aaKnown RBP12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 TBC1D28Q2M2D7 210 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF660Q6AZW8 331 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 MKXQ8IYA7 352 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 Q8NFD4 153 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR5M9Q8NGP3 310 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 NMES1Q9C002 83 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 CHMP1AQ9HD42 196 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 RAB18Q9NP72 206 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 C12orf4Q9NQ89 552 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 MBD2Q9UBB5 411 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 DOCK7Q96N67 2140 aa12.02□□□□□ -0.49
APOBEC3D-202ENST00000427494 TRAPPC2LH3BP13 241 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 LILRA1O75019 489 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 LYZL6O75951 148 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR2F2O95006 317 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CRHP06850 196 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 IL32P24001 234 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 PTGER4P35408 488 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 UBE2NP61088 152 aaKnown RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 TGFBR3Q03167 851 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR2F1Q13607 317 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 ELP2Q6IA86 826 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM214BQ7L5A3 538 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR5P3Q8WZ94 311 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 F8VVB4 439 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms