RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 TRAPPC6BQ86SZ2 158 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 FOXRED2Q8IWF2 684 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 THEM6Q8WUY1 208 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 SNX22Q96L94 193 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
HDAC6-206ENST00000426196 IL20Q9NYY1 176 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 ENPP5Q9UJA9 477 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDAC6-206ENST00000426196 BAIAP2Q9UQB8 552 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 ARRDC5A6NEK1 342 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 RIIAD1A6NNX1 92 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 EDF1O60869 148 aaKnown RBP11.14□□□□□ -0.63
HDAC6-206ENST00000426196 H2AFXP16104 143 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-206ENST00000426196 ZNF3P17036 446 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 CXorf66Q5JRM2 361 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-206ENST00000426196 SAMD4BQ5PRF9 694 aaKnown RBP11.14□□□□□ -0.63
HDAC6-206ENST00000426196 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 STPG2Q8N412 459 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 TPRX1Q8N7U7 411 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 OR8D4Q8NGM9 314 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 SAR1AQ9NR31 198 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 PIGLQ9Y2B2 252 aa11.14□□□□□ -0.63
HDAC6-206ENST00000426196 OOSP1A8MZH6 123 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 MMP23AO75900 390 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 IGLV1-47P01700 117 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
HDAC6-206ENST00000426196 MPZP25189 248 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 PEX2P28328 305 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 RRM2P31350 389 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 PRAMEF5Q5TYX0 476 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 ASRGL1Q7L266 308 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 TRPM8Q7Z2W7 1104 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 DRAM1Q8N682 238 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 C5orf56Q8N8D9 126 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 TRMT10AQ8TBZ6 339 aaKnown RBP11.13□□□□□ -0.63
HDAC6-206ENST00000426196 HOPXQ9BPY8 73 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-206ENST00000426196 TSSK6Q9BXA6 273 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 GAL3ST2Q9H3Q3 398 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 EDA2RQ9HAV5 297 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 V9GYQ6 96 aa11.13□□□□□ -0.63
HDAC6-206ENST00000426196 PQLC2LA1A4F0 135 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 FAM172BPA6NC97 362 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 TOR1AO14656 332 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 FGF16O43320 207 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 GMNNO75496 209 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 IGHG2P01859 326 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 HCKP08631 526 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-206ENST00000426196 VEGFCP49767 419 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 HES1Q14469 280 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 GRK1Q15835 563 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 PNLIPRP3Q17RR3 467 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 HLA-DRB5Q30154 266 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 SLX4IPQ5VYV7 408 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 THNSL2Q86YJ6 484 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 OR2T33Q8NG76 320 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 OTULINQ96BN8 352 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 RNFT2Q96EX2 444 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 MED20Q9H944 212 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 PCDHB16Q9NRJ7 776 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 GLS2Q9UI32 602 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 UBE2J1Q9Y385 318 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-206ENST00000426196 TNCP24821 2201 aa11.12□□□□□ -0.63
HDAC6-206ENST00000426196 TMEM82A0PJX8 343 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 ACOD1A6NK06 481 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 BUB1B-PAK6H3BSN5 160 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 CCRL2O00421 344 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 GABRR1P24046 479 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 CDK2P24941 298 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 IL24Q13007 206 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 FHL3Q13643 280 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 RBM39Q14498 530 aaKnown RBP11.11□□□□□ -0.63
HDAC6-206ENST00000426196 CLVS2Q5SYC1 327 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 GLYATQ6IB77 296 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 BAIAP2L2Q6UXY1 529 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 OR9Q2Q8NGE9 314 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 OR51E1Q8TCB6 317 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 RPEQ96AT9 228 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 GON7Q9BXV9 100 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 PKIBQ9C010 78 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 CHST6Q9GZX3 395 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 GPR173Q9NS66 373 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 DNAJB9Q9UBS3 223 aa11.11□□□□□ -0.63
HDAC6-206ENST00000426196 TRGV10A0A0A0MS01 117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms