RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MSTNO14793 375 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 NQO2P16083 231 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ALDH3B1P43353 468 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF133P52736 654 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 GUSBP11Q6P575 273 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 WDR74Q6RFH5 385 aaPredicted RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC16A14Q7RTX9 510 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 FBXL14Q8N1E6 418 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF561Q8N587 486 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM156Q8N614 296 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 CADM4Q8NFZ8 388 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 MARS2Q96GW9 593 aaKnown RBP6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 MTCH2Q9Y6C9 303 aa6.56□□□□□ -1.36
SMARCC1-202ENST00000425518 DANCRP0C864 163 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ECI1P42126 302 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 HGFACQ04756 655 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM187Q14656 261 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 RTL6Q6ICC9 239 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF774Q6NX45 483 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 AKR7LQ8NHP1 331 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 SPSB2Q99619 263 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 STARD10Q9Y365 291 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 POMT1Q9Y6A1 747 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 CCDC187A0A096LP49 1063 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 LINC00587B1AMM8 73 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 MASP2O00187 686 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ST8SIA3O43173 380 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 GPR137BO60478 399 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 NR2C1P13056 603 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 CTSSP25774 331 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 GLP1RP43220 463 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF84P51523 738 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 AFF3P51826 1226 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF565Q8N9K5 539 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 SLAMF9Q96A28 289 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC2A9Q9NRM0 540 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 SEMA5BQ9P283 1151 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 FAM24AA6NFZ4 105 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 TNFSF11O14788 317 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 GPR37O15354 613 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 RRP8O43159 456 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNHIT1O43257 154 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 FABP1P07148 127 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 DUSP1P28562 367 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 PPP1CCP36873 323 aaKnown RBP6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 CCL7P80098 99 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 PPA1Q15181 289 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 HMGN3Q15651 99 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 C5orf24Q7Z6I8 188 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 NABP1Q96AH0 204 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 RARRES2Q99969 163 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF442Q9H7R0 627 aa6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 C19orf25Q9UFG5 118 aaPredicted RBP6.55□□□□□ -1.36
SMARCC1-202ENST00000425518 IGLV3-32A0A0A0MS00 114 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 NXPH3O95157 252 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SEC11BP0C7V7 166 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 CCL3P10147 92 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SRFP11831 508 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 RAB5AP20339 215 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 RBP2P50120 134 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 HERV-K104P61576 105 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 GNMTQ14749 295 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SPIN3Q5JUX0 258 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 NSUN5P2Q63ZY6 315 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 LGI3Q8N145 548 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 PIGCQ92535 297 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SYT3Q9BQG1 590 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF700Q9H0M5 742 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 DKKL1Q9UK85 242 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ST3GAL6Q9Y274 331 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 CHCHD2Q9Y6H1 151 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 NSG1A0A0A6YYJ2 146 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 OR7C1O76099 320 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ONECUT2O95948 504 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 IGLV3-1P01715 115 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 P2RY1P47900 373 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SULT1A1P50225 295 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 S100A12P80511 92 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SOHLH1Q5JUK2 328 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 MAML2Q8IZL2 1156 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 RNF122Q9H9V4 155 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 CRLF2Q9HC73 371 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 FSCN3Q9NQT6 498 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A0J9YW62 118 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 A0A1W2PQM1 296 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 NRASP01111 189 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 FOLR2P14207 255 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 B4GALT1P15291 398 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms