RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 PTX4Q96A99 478 aa13.8□□□□□ -0.2
SAPCD1-209ENST00000425424 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
SAPCD1-209ENST00000425424 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
SAPCD1-209ENST00000425424 NLKQ9UBE8 527 aa13.8□□□□□ -0.2
SAPCD1-209ENST00000425424 NAV2Q8IVL1 2488 aa13.8□□□□□ -0.2
SAPCD1-209ENST00000425424 TACC2O95359 2948 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 A6NHS1 94 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 TMEM14DPA8MWL7 114 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 LDLRAD4O15165 306 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 CLEC2LP0C7M8 214 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 GTF2F2P13984 249 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 CD80P33681 288 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 NR4A2P43354 598 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 RORCP51449 518 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 HNRNPA0Q13151 305 aaKnown RBP13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 IL13RA2Q14627 380 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 SPCS2Q15005 226 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ZMYND11Q15326 602 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 HES5Q5TA89 166 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ATPAF1Q5TC12 328 aaPredicted RBP13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 DCDC5Q6ZRR9 648 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 SPICQ8N5J4 248 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 KCNG3Q8TAE7 436 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM3DQ96BQ1 224 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 NKX3-1Q99801 234 aaPredicted RBP13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 BPESC1Q9GZL8 116 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 WDR13Q9H1Z4 485 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 LIN7BQ9HAP6 207 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 RBFOX1Q9NWB1 397 aaKnown RBP13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 CCDC59Q9P031 241 aaKnown RBP13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ABRACLQ9P1F3 81 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ING4Q9UNL4 249 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 ETV7Q9Y603 341 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 USF3Q68DE3 2245 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 AKAP6Q13023 2319 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 SPG11Q96JI7 2443 aa13.79□□□□□ -0.2
SAPCD1-209ENST00000425424 PDZD2O15018 2839 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A10PA6NDY2 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A18PA6NE21 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A16PA6NEW6 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 CCDC160A6NGH7 325 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A20PA6NIJ5 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A8PA6NJQ4 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A7PA6NKC0 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A22PA8MWA6 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A12PA8MX19 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A5PA8MXJ8 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A23PA8MXZ1 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 F8VVB4 439 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 F8VWA3 439 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 TNFRSF13BO14836 293 aaPredicted RBP13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 WNT9BO14905 357 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A15PP0C7V4 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A13PP0C7W8 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A14PP0C7W9 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM90A24PP0C7X0 464 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 RAB6AP20340 208 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 FAM189A2Q15884 450 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 CARTPTQ16568 116 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 SLC22A6Q4U2R8 563 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 OSR2Q8N2R0 312 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 ANGPTL6Q8NI99 470 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 ACOT12Q8WYK0 555 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 IFT22Q9H7X7 185 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 KAAG1Q9UBP8 84 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 DAPK2Q9UIK4 370 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
SAPCD1-209ENST00000425424 IGHV4-30-2A0A087WSY4 118 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 SMIM30A4D0T7 59 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 OR2AT4A6NND4 320 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 H3BUI4 141 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 HTR3BO95264 441 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 PSG2P11465 335 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 PRKACAP17612 351 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 SERPINA2P20848 420 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 SOX6P35712 828 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 ART1P52961 327 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 CAV3P56539 151 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 RBM11P57052 281 aaKnown RBP13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 MPV17LQ2QL34 196 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 FAM201AQ5SY85 155 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 AP3S1Q92572 193 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 SDSLQ96GA7 329 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 TMEM246Q9BRR3 403 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 TM2D1Q9BX74 207 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 GLS2Q9UI32 602 aa13.77□□□□□ -0.21
SAPCD1-209ENST00000425424 IGKV1D-17A0A075B6S4 117 aa13.76□□□□□ -0.21
SAPCD1-209ENST00000425424 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
SAPCD1-209ENST00000425424 CRTAPO75718 401 aaPredicted RBP13.76□□□□□ -0.21
SAPCD1-209ENST00000425424 SLC2A2P11168 524 aaPredicted RBP13.76□□□□□ -0.21
SAPCD1-209ENST00000425424 MGMTP16455 207 aa13.76□□□□□ -0.21
SAPCD1-209ENST00000425424 ZNF182P17025 639 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms