RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FAM157AC9JC47 383 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 BCAT2O15382 392 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 LCATP04180 440 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 SNCAP37840 140 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 EIF1P41567 113 aaKnown RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 FABP9Q0Z7S8 132 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC16A14Q7RTX9 510 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 PPP1R3BQ86XI6 285 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 TMEM156Q8N614 296 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 FAM213BQ8TBF2 198 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 V9GYS6 101 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 MSTNO14793 375 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 GEMIN2O14893 280 aaKnown RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 PHF1O43189 567 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 ECI1P42126 302 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 ALDH3B1P43353 468 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 CLINT1Q14677 625 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 TMEM182Q6ZP80 229 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 MARS2Q96GW9 593 aaKnown RBP13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 NIT2Q9NQR4 276 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 TXNL1O43396 289 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 GDF9O60383 454 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 NR2C1P13056 603 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 OMGP23515 440 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 SHBQ15464 509 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 C19orf12Q9NSK7 152 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 POMT1Q9Y6A1 747 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 TP53I11O14683 189 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 AFF3P51826 1226 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 BORCS8Q96FH0 119 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 SPSB2Q99619 263 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 RCL1Q9Y2P8 373 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEMA3B-203ENST00000419007 CCDC163A0A0D9SF12 145 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 MT-ND4LP03901 98 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF84P51523 738 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 FBXL14Q8N1E6 418 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 SLAMF9Q96A28 289 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 STARD10Q9Y365 291 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 RFNGQ9Y644 331 aa13.21□□□□□ -0.3
SEMA3B-203ENST00000419007 BDP1A6H8Y1 2624 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 A0A1W2PPE2 198 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 NQO2P16083 231 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 HGFACQ04756 655 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 TMEM187Q14656 261 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 COL19A1Q14993 1142 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 CCDC187A0A096LP49 1063 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 DANCRP0C864 163 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 CTSSP25774 331 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 GLP1RP43220 463 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 HMGN3Q15651 99 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 AKR7LQ8NHP1 331 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 NABP1Q96AH0 204 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 SEMA5BQ9P283 1151 aa13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 C19orf25Q9UFG5 118 aaPredicted RBP13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 CHCHD2Q9Y6H1 151 aaPredicted RBP13.2□□□□□ -0.3
SEMA3B-203ENST00000419007 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 IGLV3-32A0A0A0MS00 114 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 TNFSF11O14788 317 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 GPR37O15354 613 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 SRFP11831 508 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 PPA1Q15181 289 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 NSUN5P2Q63ZY6 315 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 RNF122Q9H9V4 155 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 DKKL1Q9UK85 242 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 PI4KAP42356 2102 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 MASP2O00187 686 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 ST8SIA3O43173 380 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 GPR137BO60478 399 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 IGLV3-1P01715 115 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 PPP1CCP36873 323 aaKnown RBP13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 HERV-K104P61576 105 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 RNF138Q8WVD3 245 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 NSG1A0A0A6YYJ2 146 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 SEC11BP0C7V7 166 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 DUSP1P28562 367 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 P2RY1P47900 373 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 RBP2P50120 134 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF565Q8N9K5 539 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 OR10AD1Q8NGE0 317 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 TCEAL3Q969E4 200 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 ST3GAL6Q9Y274 331 aa13.19□□□□□ -0.3
SEMA3B-203ENST00000419007 C5orf52A6NGY3 159 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 NXPH3O95157 252 aa13.18□□□□□ -0.3
SEMA3B-203ENST00000419007 FABP1P07148 127 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms