RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NKAIN1Q4KMZ8 207 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 POMZP3Q6PJE2 187 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SPRED2Q7Z698 418 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 OIT3Q8WWZ8 545 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 VN1R1Q9GZP7 353 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 ASCL3Q9NQ33 180 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PCNX3Q9H6A9 2034 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF732B4DXR9 585 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PPP5D1E7EU14 171 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PQBP1O60828 265 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 AHSA1O95433 338 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 THEGLP0DJG4 465 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 GALNSP34059 522 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 ALDH3B1P43353 468 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 RAB11AP62491 216 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 TLE4Q04727 773 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 GNMTQ14749 295 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 P2RY6Q15077 328 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 C1orf189Q5VU69 101 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SFTPA1Q8IWL2 248 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 MAML2Q8IZL2 1156 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 OR51T1Q8NGJ9 327 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PECRQ9BY49 303 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 OR10A5Q9H207 317 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 RIMS4Q9H426 269 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 C11orf1Q9H5F2 150 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SDF2L1Q9HCN8 221 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 GPR173Q9NS66 373 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF701Q9NV72 531 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 P4HTMQ9NXG6 502 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SEMA5BQ9P283 1151 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 POLR2HP52434 150 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 C1orf53Q5VUE5 145 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 KLHL24Q6TFL4 600 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 P4HA3Q7Z4N8 544 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 TGIF2LYQ8IUE0 185 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM171Q8WVE6 324 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 GNPNAT1Q96EK6 184 aaPredicted RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 CALHM2Q9HA72 323 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 TBX21Q9UL17 535 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 YLPM1P49750 1951 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 PRKNO60260 465 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 CA11O75493 328 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 BLVRBP30043 206 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 CLN3Q13286 438 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 ARL6IP1Q15041 203 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 ARSJQ5FYB0 599 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 BTNL3Q6UXE8 466 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 DPPA3Q6W0C5 159 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FAM185AQ8N0U4 392 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 OR4D5Q8NGN0 318 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 OR51E1Q8TCB6 317 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 GAB2Q9UQC2 676 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 POLR3KQ9Y2Y1 108 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 TRAV1-1A0A0B4J248 108 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 IGSF23A1L1A6 192 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FAM24AA6NFZ4 105 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 PFN1P07737 140 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 RPL29P47914 159 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC6A8P48029 635 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 SEC13P55735 322 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FMODQ06828 376 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FUT7Q11130 342 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 COTL1Q14019 142 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 NCR3LG1Q68D85 454 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 DNM1P34Q6PK57 102 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 OR2AJ1Q8NGZ0 328 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 RTN4IP1Q8WWV3 396 aaPredicted RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 SLAMF6Q96DU3 332 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 LRRC3BQ96PB8 259 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 LRFN1Q9P244 771 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC7A11Q9UPY5 501 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FAM221AA4D161 298 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 PLPP3O14495 311 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 PVRP15151 417 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 ALKBH2Q6NS38 261 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 OR10G6Q8NH81 332 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM170AQ8WVE7 144 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 ELSPBP1Q96BH3 223 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 MSI2Q96DH6 328 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 DGAT2Q96PD7 388 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 GPER1Q99527 375 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 FAAP24Q9BTP7 215 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 TPSD1Q9BZJ3 242 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 LIME1Q9H400 295 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 STARD5Q9NSY2 213 aa7.01□□□□□ -1.29
HMGXB4-202ENST00000418170 B4E171 279 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 UTS2O95399 124 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CEACAM1P13688 526 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TSPAN7P41732 249 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 LBX1P52954 281 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 HSD17B7P56937 341 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 IGLV3-21P80748 117 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms