RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR4S1Q8NGB4 309 aa11.66□□□□□ -0.54
PAF1-202ENST00000416728 TMEM163Q8TC26 289 aa11.66□□□□□ -0.54
PAF1-202ENST00000416728 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
PAF1-202ENST00000416728 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
PAF1-202ENST00000416728 A6NDX4 124 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 XPNPEP2O43895 674 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 ZNF737O75373 536 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 PEX14O75381 377 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 IGHV1-8P0DP01 117 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 CD28P10747 220 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 OR12D2P58182 307 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 EMX1Q04741 257 aaPredicted RBP11.65□□□□□ -0.55
PAF1-202ENST00000416728 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 OR8H2Q8N162 312 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 YIPF7Q8N8F6 280 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 OR11H6Q8NGC7 330 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 ZNF714Q96N38 554 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 IL4I1Q96RQ9 567 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 CADM1Q9BY67 442 aaKnown RBP11.65□□□□□ -0.55
PAF1-202ENST00000416728 PRSS22Q9GZN4 317 aa11.65□□□□□ -0.55
PAF1-202ENST00000416728 ZAR1LA6NP61 321 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 F8VVB4 439 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 F8VWA3 439 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 H3BSH0 61 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 F2RL2O00254 374 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 SYT7O43581 403 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 MITFO75030 526 aaPredicted RBP11.64□□□□□ -0.55
PAF1-202ENST00000416728 GATBO75879 557 aaKnown RBP11.64□□□□□ -0.55
PAF1-202ENST00000416728 INMTO95050 263 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 EPHA2P29317 976 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 EFNB1P98172 346 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 MEF2CQ06413 473 aaPredicted RBP11.64□□□□□ -0.55
PAF1-202ENST00000416728 EDDM3AQ14507 147 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 ARSJQ5FYB0 599 aaPredicted RBP11.64□□□□□ -0.55
PAF1-202ENST00000416728 LDLRAD2Q5SZI1 272 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 C12orf73Q69YU5 71 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 SSX6Q7RTT6 188 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 UTP4Q969X6 686 aaKnown RBP11.64□□□□□ -0.55
PAF1-202ENST00000416728 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 SNX22Q96L94 193 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 TBX5Q99593 518 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 MMP28Q9H239 520 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
PAF1-202ENST00000416728 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 G3V2T6 193 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 PIN1P1O15428 100 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
PAF1-202ENST00000416728 SERPINA3P01011 423 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 DYNLT3P51808 116 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 FUT6P51993 359 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 ACTA2P62736 377 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 ACTG2P63267 376 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 ACTC1P68032 377 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 ACTA1P68133 377 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 UBE2V2Q15819 145 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 Q6ZPA2 131 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 CATSPERDQ86XM0 798 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 EGFL6Q8IUX8 553 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 BORCS8Q96FH0 119 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 OR5M11Q96RB7 305 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 CITED2Q99967 270 aaPredicted RBP11.63□□□□□ -0.55
PAF1-202ENST00000416728 ADI1Q9BV57 179 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 CHST5Q9GZS9 411 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 WARS2Q9UGM6 360 aaKnown RBP11.63□□□□□ -0.55
PAF1-202ENST00000416728 ENOPH1Q9UHY7 261 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 HILPDAQ9Y5L2 63 aa11.63□□□□□ -0.55
PAF1-202ENST00000416728 IGKV1-27A0A075B6S5 117 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 A0A1W2PQL4 384 aaPredicted RBP11.62□□□□□ -0.55
PAF1-202ENST00000416728 TMEM82A0PJX8 343 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 METTL15A6NJ78 407 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 HAND1O96004 215 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 ALDOBP05062 364 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 OR2T7P0C7T2 308 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 GABRR1P24046 479 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 PEX2P28328 305 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 SLC34A1Q06495 639 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 MINOS1Q5TGZ0 78 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 Q8IYB0 196 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 ZNF676Q8N7Q3 588 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 CCDC54Q8NEL0 328 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 NDNFQ8TB73 568 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 EMG1Q92979 244 aaKnown RBP11.62□□□□□ -0.55
PAF1-202ENST00000416728 SLC7A6OSQ96CW6 309 aaPredicted RBP11.62□□□□□ -0.55
PAF1-202ENST00000416728 WNT10AQ9GZT5 417 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 SESN1Q9Y6P5 492 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 MINOS1-NBL1R4GNA1 71 aa11.62□□□□□ -0.55
PAF1-202ENST00000416728 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 H3BUI4 141 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 SULT1C4O75897 302 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 APOL3O95236 402 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 IGHA1P01876 353 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 HTR1FP30939 366 aa11.61□□□□□ -0.55
PAF1-202ENST00000416728 ATP6V1E1P36543 226 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms