RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 LY6EQ16553 131 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 SLC25A30Q5SVS4 291 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 SLC25A26Q70HW3 274 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 GDPD3Q7L5L3 318 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 Q8IYB0 196 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 DTX3Q8N9I9 347 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 DNAAF1Q8NEP3 725 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 PYDC1Q8WXC3 89 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 UBE2FQ969M7 185 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 SLAMF9Q96A28 289 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 HRASLS5Q96KN8 279 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 SNX22Q96L94 193 aa14.29□□□□□ -0.12
PDLIM2-208ENST00000416159 F8VVB4 439 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 F8VWA3 439 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 ZNF737O75373 536 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 INMTO95050 263 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 RBP4P02753 201 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 ALPLP05186 524 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 ZNF728P0DKX0 622 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 KIR2DS4P43632 304 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 RBP2P50120 134 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 BMXP51813 675 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 DLX6P56179 175 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 EDDM3BP56851 147 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 MEDAGQ5VYS4 303 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 C11orf88Q6PI97 169 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 ZNF782Q6ZMW2 699 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 RDH10Q8IZV5 341 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 OR2G2Q8NGZ5 317 aa14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 RANBP3Q9H6Z4 567 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-208ENST00000416159 DSCAML1Q8TD84 2053 aa14.27□□□□□ -0.12
PDLIM2-208ENST00000416159 DAPL1A0PJW8 107 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 FAM90A8PA6NJQ4 464 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 SNTNA6NMZ2 147 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 ENTPD6O75354 484 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 CYB5AP00167 134 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 PRKACBP22694 351 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 SNRPGP62308 76 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 MEF2CQ06413 473 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 ZFP1Q6P2D0 407 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 FDX2Q6P4F2 183 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 UTS2BQ765I0 119 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 OR8H2Q8N162 312 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 OR4C13Q8NGP0 309 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 OR13D1Q8NGV5 346 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 EMG1Q92979 244 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 RNF166Q96A37 237 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 RNFT2Q96EX2 444 aa14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 ADAT3Q96EY9 351 aaPredicted RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 TBL2Q9Y4P3 447 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-208ENST00000416159 J3QRE1 110 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 EI24O14681 340 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 HAND1O96004 215 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 ISG15P05161 165 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 HTR1AP08908 422 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 ATF1P18846 271 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 PEX2P28328 305 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 HERPUD1Q15011 391 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 LHFPL4Q7Z7J7 247 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 MALSU1Q96EH3 234 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 MYCBPQ99417 103 aaPredicted RBP14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 FRRS1LQ9P0K9 344 aa14.26□□□□□ -0.13
PDLIM2-208ENST00000416159 TRBV2A0A0J9YWF9 115 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 hADV38S2A0JD32 116 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 TMEM82A0PJX8 343 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 VGLL3A8MV65 326 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 SLC16A6O15403 523 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ARG1P05089 322 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 IGHV1-8P0DP01 117 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF20P17024 532 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 AZGP1P25311 298 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 PAX6P26367 422 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 POU3F4P49335 361 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ALDH3A2P51648 485 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 CCR9P51686 369 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 EFNB2P52799 333 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 MTCP1P56278 107 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 OR12D2P58182 307 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF91Q05481 1191 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ZIK1Q3SY52 487 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 Q6ZTK2 550 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 LHFPL2Q6ZUX7 228 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 C10orf67Q8IYJ2 551 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 FAM58AQ8N1B3 248 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ACBD7Q8N6N7 88 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 OR11H6Q8NGC7 330 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 OR2T6Q8NHC8 308 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 PIFOQ8TCI5 191 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 FGGYQ96C11 551 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 FOXRED1Q96CU9 486 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 MRPL48Q96GC5 212 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 ZNF714Q96N38 554 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 MBOAT4Q96T53 435 aa14.25□□□□□ -0.13
PDLIM2-208ENST00000416159 CDCA4Q9BXL8 241 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms