RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 RBFOX1Q9NWB1 397 aaKnown RBP11.15□□□□□ -0.62
CNN3-203ENST00000415017 ZNF222Q9UK12 451 aa11.15□□□□□ -0.62
CNN3-203ENST00000415017 PLEKHA6Q9Y2H5 1048 aa11.15□□□□□ -0.62
CNN3-203ENST00000415017 NPTNQ9Y639 398 aa11.15□□□□□ -0.62
CNN3-203ENST00000415017 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A10PA6NDY2 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A7PA6NKC0 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 A6NLC8 198 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 LRRC30A6NM36 301 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A22PA8MWA6 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A5PA8MXJ8 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A23PA8MXZ1 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 WNT9BO14905 357 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 CDC14BO60729 498 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 LY6HO94772 140 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 CYB5AP00167 134 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 PLATP00750 562 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A15PP0C7V4 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A13PP0C7W8 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A14PP0C7W9 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM90A24PP0C7X0 464 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 EFNB2P52799 333 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 TMEM33P57088 247 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 HOXA4Q00056 320 aaPredicted RBP11.14□□□□□ -0.63
CNN3-203ENST00000415017 RSU1Q15404 277 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 HFEQ30201 348 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 ATPAF1Q5TC12 328 aaPredicted RBP11.14□□□□□ -0.63
CNN3-203ENST00000415017 LINC00299Q6ZSB3 139 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FAM58AQ8N1B3 248 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 OSR2Q8N2R0 312 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 LGALS14Q8TCE9 139 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 AP3S1Q92572 193 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 CST11Q9H112 138 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 MIXL1Q9H2W2 232 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 KCNK15Q9H427 330 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
CNN3-203ENST00000415017 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 PTTG2Q9NZH5 202 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 EDARQ9UNE0 448 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 ING4Q9UNL4 249 aa11.14□□□□□ -0.63
CNN3-203ENST00000415017 FLNBO75369 2602 aaKnown RBP11.14□□□□□ -0.63
CNN3-203ENST00000415017 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 LYNX1G3V0Z9 82 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 TPD52L2O43399 206 aaKnown RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 KNG1P01042 644 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 IGHV2-70P01814 119 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 LYNX1P0DP58 116 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 GTF2F2P13984 249 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 MUC1P15941 1255 aaPredicted RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 MGMTP16455 207 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 AMY2BP19961 511 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 LMO1P25800 156 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 IL13RA2Q14627 380 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 SLC22A6Q4U2R8 563 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 SPIN3Q5JUX0 258 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 STUMQ69YW2 141 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 OR10K2Q6IF99 312 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 Q6P435 159 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 C1orf87Q8N0U7 546 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 OR10K1Q8NGX5 313 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 ANGPTL6Q8NI99 470 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 CCL17Q92583 94 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 S100A13Q99584 98 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
CNN3-203ENST00000415017 DNTTIP1Q9H147 329 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 TMEM165Q9HC07 324 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
CNN3-203ENST00000415017 YLPM1P49750 1951 aaKnown RBP11.12□□□□□ -0.63
CNN3-203ENST00000415017 IGKV1D-17A0A075B6S4 117 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 PPIAL4DF5H284 164 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 RAB27BO00194 218 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 LGALS8O00214 317 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 CTDSP2O14595 271 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 HTR3BO95264 441 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 APOA1P02647 267 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 PPIAL4FP0DN26 164 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 GLRA1P23415 457 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 ZMYND11Q15326 602 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 SIGIRRQ6IA17 410 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 LRRC28Q86X40 367 aaPredicted RBP11.12□□□□□ -0.63
CNN3-203ENST00000415017 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 WDFY2Q96P53 400 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms