RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 AK6Q9Y3D8 172 aaKnown RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 SNRPGP15A8MWD9 76 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ARPC5O15511 151 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 CREBL2O60519 120 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 LILRA1O75019 489 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 CRYAAP02489 173 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 SNRPBP14678 240 aaKnown RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 AP3S2P59780 193 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 DEFA5Q01523 94 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 BSPH1Q075Z2 132 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 OR8B8Q15620 311 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF626Q68DY1 528 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 PGAP1Q75T13 922 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 SLC25A40Q8TBP6 338 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ARL6Q9H0F7 186 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 DNTTIP1Q9H147 329 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 FZR1Q9UM11 496 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 IL5P05113 134 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-202ENST00000414700 AGAP20933 346 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 MALLQ13021 153 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 MRPL21Q7Z2W9 205 aaKnown RBP13.31□□□□□ -0.28
SHMT2-202ENST00000414700 LRRTM1Q86UE6 522 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 SEMA6DQ8NFY4 1073 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 OR56B2PQ8NGI1 322 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 PHYHIPQ92561 330 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 SLC25A32Q9H2D1 315 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 TCF7L1Q9HCS4 588 aa13.31□□□□□ -0.28
SHMT2-202ENST00000414700 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 LOC390937A0A1W2PQ73 354 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF20P17024 532 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 MPV17P39210 176 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 MEOX2P50222 304 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 POLR2GP62487 172 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-202ENST00000414700 SORDQ00796 357 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 MSMPQ1L6U9 139 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 ALKBH6Q3KRA9 238 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-202ENST00000414700 TMEM108Q6UXF1 575 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 RNF144BQ7Z419 303 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 TMEM17Q86X19 198 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 SERPINA12Q8IW75 414 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 PXT1Q8NFP0 134 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 SIX6O95475 246 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 ATF1P18846 271 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 SRSF1Q07955 248 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-202ENST00000414700 HFEQ30201 348 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 UBE2NLQ5JXB2 153 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 OR2T2Q6IF00 324 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 OR5L1Q8NGL2 311 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 KLF14Q8TD94 323 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-202ENST00000414700 MARS2Q96GW9 593 aaKnown RBP13.3□□□□□ -0.28
SHMT2-202ENST00000414700 CMTM3Q96MX0 182 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 BIN3Q9NQY0 253 aa13.3□□□□□ -0.28
SHMT2-202ENST00000414700 HELZ2Q9BYK8 2649 aaKnown RBP13.29□□□□□ -0.28
SHMT2-202ENST00000414700 IGKV1-9A0A0C4DH69 117 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 SIAH2O43255 324 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 FSTP19883 344 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 PTAFRP25105 342 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 RAB13P51153 203 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 MECP2P51608 486 aaKnown RBP13.29□□□□□ -0.28
SHMT2-202ENST00000414700 OLFML2AQ68BL7 652 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 CMBLQ96DG6 245 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 SPACA5Q96QH8 159 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
SHMT2-202ENST00000414700 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
SHMT2-202ENST00000414700 RHBDD3Q9Y3P4 386 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 A0A0B4J203 849 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 J3QW42 95 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 FABP6P51161 128 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 NKX6-1P78426 367 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-202ENST00000414700 PSG7Q13046 419 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 UBE2V2Q15819 145 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF529Q6P280 563 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 OR5AS1Q8N127 324 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 OR5D14Q8NGL3 314 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 NPRL2Q8WTW4 380 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 THRSPQ92748 146 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 CHST5Q9GZS9 411 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 CKLFQ9UBR5 152 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 FOXJ3Q9UPW0 622 aa13.29□□□□□ -0.28
SHMT2-202ENST00000414700 FXYD6-FXYD2A0A087WZ82 144 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-202ENST00000414700 GGT3PA6NGU5 568 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 CD300LBA8K4G0 201 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
SHMT2-202ENST00000414700 DVL3Q92997 716 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-202ENST00000414700 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms