RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 GABRPO00591 440 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 NDUFB3O43676 98 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ANGPTL7O43827 346 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 SC5DO75845 299 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 KDM4BO94953 1096 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 KNG1P01042 644 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ALDOBP05062 364 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 SRD5A1P18405 259 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ADRA2CP18825 462 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 BCL3P20749 454 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 PRDX2P32119 198 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 CEBPDP49716 269 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 GABARAPL2P60520 117 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 IKZF1Q13422 519 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 MED22Q15528 200 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 TBCEQ15813 527 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 KLF17Q5JT82 389 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 CD276Q5ZPR3 534 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 UNQ9370/PRO34162Q6UXP9 181 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 BTN2A1Q7KYR7 527 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 SAXO1Q8IYX7 474 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ZNRF1Q8ND25 227 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 LY6G5BQ8NDX9 201 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 OR52N4Q8NGI2 321 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 OR5D18Q8NGL1 313 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ST8SIA4Q92187 359 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 MED30Q96HR3 178 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 DERL3Q96Q80 235 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 Q9H521 79 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 ISYNA1Q9NPH2 558 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 RBFOX1Q9NWB1 397 aaKnown RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 RPUSD1Q9UJJ7 312 aaKnown RBP10.89□□□□□ -0.67
HDAC8-210ENST00000412342 BLOC1S6Q9UL45 172 aa10.89□□□□□ -0.67
HDAC8-210ENST00000412342 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 ZNF879B4DU55 563 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 GPR37O15354 613 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 ENSAO43768 121 aaKnown RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 ZNF737O75373 536 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 INMTO95050 263 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 ECDO95905 644 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 SFTPBP07988 381 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 HCKP08631 526 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 PPIAL4GP0DN37 164 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 MMP9P14780 707 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 GABRA2P47869 451 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 GP2P55259 537 aaKnown RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 CAV3P56539 151 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 MLLT11Q13015 90 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 GPR50Q13585 617 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 TPBGQ13641 420 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 INSL4Q14641 139 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 KRTAP21-3Q3LHN1 58 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 BTNL3Q6UXE8 466 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 LYPD6Q86Y78 171 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 MKXQ8IYA7 352 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 Q8IYB0 196 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 ZSCAN4Q8NAM6 433 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 DCTN5Q9BTE1 182 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 CCDC90BQ9GZT6 254 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 NEK6Q9HC98 313 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-210ENST00000412342 AUP1Q9Y679 476 aa10.88□□□□□ -0.67
HDAC8-210ENST00000412342 A0A1W2PPK0 400 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 MRPS14O60783 128 aaKnown RBP10.87□□□□□ -0.67
HDAC8-210ENST00000412342 OCMP0CE72 109 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-210ENST00000412342 ZNF146Q15072 292 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 LRRC10Q5BKY1 277 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 ASCL4Q6XD76 172 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 FAM58AQ8N1B3 248 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 ZNF561Q8N587 486 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 Q8NFD4 153 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 PXT1Q8NFP0 134 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 EMG1Q92979 244 aaKnown RBP10.87□□□□□ -0.67
HDAC8-210ENST00000412342 MRI1Q9BV20 369 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 SIRPDQ9H106 197 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 ELL3Q9HB65 397 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-210ENST00000412342 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 TMEM138Q9NPI0 162 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 ACOT13Q9NPJ3 140 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 OR14J1Q9UGF5 321 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 FOXJ3Q9UPW0 622 aa10.87□□□□□ -0.67
HDAC8-210ENST00000412342 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
HDAC8-210ENST00000412342 TMEM82A0PJX8 343 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 CYB5AP00167 134 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 LIPFP07098 398 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 CPEP16870 476 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 BDKRB2P30411 391 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
HDAC8-210ENST00000412342 TGFBR2P37173 567 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 OR3A4PP47883 348 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 FGF12P61328 243 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 PPP3R1P63098 170 aa10.86□□□□□ -0.67
HDAC8-210ENST00000412342 EMX1Q04741 257 aaPredicted RBP10.86□□□□□ -0.67
HDAC8-210ENST00000412342 FAM27D1Q5T7N8 215 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms