RNA–Protein interactions for RNA: ENST00000409945.1

USP40-202, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-202ENST00000409945 ADRA2CP18825 462 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 PAICSP22234 425 aaKnown RBP5.3□□□□□ -1.56
USP40-202ENST00000409945 PRKACGP22612 351 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 DCKP27707 260 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 EPHA2P29317 976 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 HTR5AP47898 357 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 RGS6P49758 472 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 DAPP51397 102 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 LCN6P62502 163 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 CSNK2BP67870 215 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 MICAQ29983 383 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 MESTQ5EB52 335 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 AADACL4Q5VUY2 407 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 TMEM182Q6ZP80 229 aaPredicted RBP5.3□□□□□ -1.56
USP40-202ENST00000409945 CLVS1Q8IUQ0 354 aaPredicted RBP5.3□□□□□ -1.56
USP40-202ENST00000409945 LRRC75AQ8NAA5 344 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 AQP11Q8NBQ7 271 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR2T33Q8NG76 320 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR56B2PQ8NGI1 322 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR4C15Q8NGM1 316 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR1J1Q8NGS3 322 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR2T4Q8NH00 348 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 TEX47Q8TBZ9 253 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 ISOC1Q96CN7 298 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 RASD2Q96D21 266 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 PRRG3Q9BZD7 231 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 OR2H1Q9GZK4 316 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 EGLN1Q9GZT9 426 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 ZFP57Q9NU63 452 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 VNN3Q9NY84 501 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 IL20RAQ9UHF4 553 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 KCNG2Q9UJ96 466 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 WDR83OSQ9Y284 106 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 TPRKBQ9Y3C4 175 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 GRIP1Q9Y3R0 1128 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 CDH10Q9Y6N8 788 aa5.3□□□□□ -1.56
USP40-202ENST00000409945 ARRDC5A6NEK1 342 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 OR6C6A6NF89 314 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ANXA2P2A6NMY6 339 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 H3BN98 237 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SLC1A7O00341 560 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TLX2O43763 284 aaPredicted RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 ZNF3P17036 446 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 USF1P22415 310 aaPredicted RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 GSSP48637 474 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TMBIM6P55061 237 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PSG4Q00888 419 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 IL5RAQ01344 420 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ARL16Q0P5N6 197 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ECH1Q13011 328 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 FAM76BQ5HYJ3 339 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ZNF620Q6ZNG0 422 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 RASSF6Q6ZTQ3 369 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 FOXL2NBQ6ZUU3 175 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 FAM122BQ7Z309 247 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CDH26Q8IXH8 852 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 MMD2Q8IY49 270 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ZNF525Q8N782 197 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CLDN22Q8N7P3 220 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PROKR2Q8NFJ6 384 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 OR10G2Q8NGC3 310 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 AKR7LQ8NHP1 331 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 GIPC3Q8TF64 312 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 RAB2BQ8WUD1 216 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TMIGD2Q96BF3 282 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PLEKHA8Q96JA3 519 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SAMD8Q96LT4 415 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PITX2Q99697 317 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CITED2Q99967 270 aaPredicted RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 ZNF416Q9BWM5 594 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 GABARAPL3Q9BY60 117 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 RACGAP1Q9H0H5 632 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 HDHD2Q9H0R4 259 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 OR51B6Q9H340 312 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 RIBC2Q9H4K1 309 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SCN3BQ9NY72 215 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TAAR3PQ9P1P4 343 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 ATPIF1Q9UII2 106 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CHTOPQ9Y3Y2 248 aaKnown RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 GMPPBQ9Y5P6 360 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SURF4O15260 269 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 MMP7P09237 267 aaPredicted RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 CTLA4P16410 223 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PCMT1P22061 227 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CAMLGP49069 296 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SLC3A1Q07837 685 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 PPP1R8Q12972 351 aaKnown RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 NEDD8Q15843 81 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 CLEC12AQ5QGZ9 265 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TSEN54Q7Z6J9 526 aaKnown RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 MYPOPQ86VE0 399 aaPredicted RBP5.29□□□□□ -1.56
USP40-202ENST00000409945 OR52E2Q8NGJ4 325 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 OR4K13Q8NH42 304 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 SPTSSAQ969W0 71 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 NABP1Q96AH0 204 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 TIMD4Q96H15 378 aa5.29□□□□□ -1.56
USP40-202ENST00000409945 C4orf45Q96LM5 186 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms