RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ACKR1Q16570 336 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 CHST4Q8NCG5 386 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 SAT2Q96F10 170 aaPredicted RBP12.45□□□□□ -0.42
MINDY4-202ENST00000409881 TSPAN32Q96QS1 320 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 PFDN5Q99471 154 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 MED29Q9NX70 200 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 GRHPRQ9UBQ7 328 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 DBX1A6NMT0 343 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 FAM157AC9JC47 383 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 MFNGO00587 321 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 VAMP5O95183 116 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 LY86O95711 162 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 HLA-DQA2P01906 255 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 MFGE8Q08431 387 aaPredicted RBP12.45□□□□□ -0.42
MINDY4-202ENST00000409881 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 RPL7L1Q6DKI1 246 aaKnown RBP12.45□□□□□ -0.42
MINDY4-202ENST00000409881 ABLIM2Q6H8Q1 611 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 OR9K2Q8NGE7 335 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
MINDY4-202ENST00000409881 NMES1Q9C002 83 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 CKLFQ9UBR5 152 aa12.45□□□□□ -0.42
MINDY4-202ENST00000409881 CYTIPO60759 359 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 FBXO24O75426 580 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 EDN3P14138 238 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 EMC4Q5J8M3 183 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ADAM5Q6NVV9 412 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 RTN4RL2Q86UN3 420 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 OR51F2Q8NH61 342 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 FAM57AQ8TBR7 257 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 SLC25A44Q96H78 314 aaPredicted RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 PMP2P02689 132 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 OR8U9P0C7N5 309 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 SLC6A9P48067 706 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 DAP3P51398 398 aaKnown RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 SLC9A3R2Q15599 337 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ACSF3Q4G176 576 aaPredicted RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 MCEMP1Q8IX19 187 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 SF3B5Q9BWJ5 86 aaKnown RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 PARP12Q9H0J9 701 aaKnown RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 TXNIPQ9H3M7 391 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF107Q9UII5 783 aaPredicted RBP12.44□□□□□ -0.42
MINDY4-202ENST00000409881 TIMM10BQ9Y5J6 103 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 TMEM14AQ9Y6G1 99 aa12.44□□□□□ -0.42
MINDY4-202ENST00000409881 ARID1AO14497 2285 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 C7orf77A4D0Y5 90 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 FIGNL2A6NMB9 653 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF716A6NP11 495 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 M0R036 132 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 CD2P06729 351 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 RAB5AP20339 215 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 LAP3P28838 519 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 CX3CR1P49238 355 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 CLDN17P56750 224 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
MINDY4-202ENST00000409881 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 FAM24BQ8N5W8 94 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 OTOSQ8NHW6 89 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 AQP3Q92482 292 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 OR8B4Q96RC9 309 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 CLCF1Q9UBD9 225 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 B9D1Q9UPM9 204 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF729A6NN14 1252 aaPredicted RBP12.43□□□□□ -0.42
MINDY4-202ENST00000409881 AP4M1O00189 453 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 PRRG2O14669 202 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 LDLRAD4O15165 306 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 IFNA6P05013 189 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 ARG1P05089 322 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 FCGR2AP12318 317 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
MINDY4-202ENST00000409881 BIDP55957 195 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 RBPJQ06330 500 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF260Q3ZCT1 412 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 OR4D6Q8NGJ1 314 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 ZNF385AQ96PM9 386 aaKnown RBP12.43□□□□□ -0.42
MINDY4-202ENST00000409881 SLC5A7Q9GZV3 580 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 SH3BGRL2Q9UJC5 107 aa12.43□□□□□ -0.42
MINDY4-202ENST00000409881 GTF3C1Q12789 2109 aa12.42□□□□□ -0.42
MINDY4-202ENST00000409881 XKRYO14609 159 aa12.42□□□□□ -0.42
MINDY4-202ENST00000409881 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
MINDY4-202ENST00000409881 WDR1O75083 606 aa12.42□□□□□ -0.42
MINDY4-202ENST00000409881 RENP00797 406 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms